[R] Quantile normalization and NA

Ravi Murthy ravidmurthy at yahoo.com
Sat Jul 9 22:15:38 CEST 2005


Hi,
I am new to R,
I am doing quantile normalization with a dat matix of
384X124 and I find that while computing the quantile
normailzation it introduces 'NA' into some of the
cells, can someone help me to overcome this problem ?


This is the command that goes like upto g62 for 124
colomns

>g1 <- normalize.quantiles(exprs(MSExpr[,1:2]))

For a small set of data there is no problem, but for a
large set of data, it introduces "NA" in the place
where it is suppose to geneerate data .

Ravi
ravidmurthy at yahoo.com  

Raviabi




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