[R] Creating .Rout.save files for package subdirectory "tests"
Arne Henningsen
ahenningsen at email.uni-kiel.de
Fri Nov 5 12:29:44 CET 2004
Thank you, Martin and Prof. Ripley, for your very helpful answers!
It would be nice if this could be mentioned in section 1.1.4 of the "Writing R
Extensions" manual.
Arne
On Friday 05 November 2004 12:17, Martin Maechler wrote:
> >>>>> "Arne" == Arne Henningsen <ahenningsen at email.uni-kiel.de>
> >>>>> on Fri, 5 Nov 2004 11:56:02 +0100 writes:
>
> Arne> Hi, I added the "tests" subdirectory and a test file
> Arne> (say "myTest.R") to our "systemfit" package. Up to now
> Arne> I create the "myTest.Rout.save" file with
>
> >> R CMD BATCH --vanilla myTest.R myTest.Rout.save
>
> that explains everything.
> Why do you do so?
>
> Instead:
>
> 1) Start with no '.Rout.save'
>
> 2) R CMD check <pkg>
> will produce one in <pkg>.Rcheck/tests/myTest.Rout
> Copy it to the package source, i.e. typically
>
> cp <pkg>.Rcheck/tests/myTest.Rout <pkg>/tests/myTest.Rout.save
>
> 3) R CMD check <pkg>
> now *will* do the comparison and give no difference hopefully
>
> Martin Maechler, ETH Zurich
>
>
> Arne> However, "R CMD check" reports two differences between
> Arne> myTest.Rout.save and the output of myTest.R: a)
> Arne> myTest.Rout.save contains following extra line at the
>
> Arne> beginning of the file:
> >> invisible(options(echo = TRUE))
>
> Arne> b) myTest.Rout.save contains the following 2 extra
>
> Arne> lines at the very end of the file:
> >> proc.time()
>
> Arne> [1] 1.80 0.07 2.00 0.01 0.00
>
> Arne> Everytime I change myTest.R and create a new
> Arne> myTest.R.save file I have to delete these 3 lines by
> Arne> hand. I could do this e.g. by a script using "sed",
> Arne> but I wonder if I can start "R CMD BATCH" with an
> Arne> option that suppresses any commands that are not in
> Arne> the input file, i.e. "invisible(options(echo = TRUE))"
> Arne> and "proc.time()". Or what is the easiest way to
> Arne> create .Rout.save files? (I am using R 2.0.0 on a
> Arne> i686 PC with SuSE Linux 9.0)
>
> Arne> Thanks, Arne
--
Arne Henningsen
Department of Agricultural Economics
University of Kiel
Olshausenstr. 40
D-24098 Kiel (Germany)
Tel: +49-431-880 4445
Fax: +49-431-880 1397
ahenningsen at agric-econ.uni-kiel.de
http://www.uni-kiel.de/agrarpol/ahenningsen/
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