[R] Creating survival object
Thomas W Blackwell
tblackw at umich.edu
Sun Oct 5 21:02:11 CEST 2003
Jens -
After reading Help("Surv"), yes, I think you have interpreted
the two required arguments to Surv() correctly. I don't know
of a ready-made function to do the transformation you illustrate.
If I had to program it myself, I would use diff(), rep() and
order().
- tom blackwell - u michigan medical school - ann arbor -
On Sun, 5 Oct 2003, Jens Schmidt wrote:
> I have survival data from a population:
>
> time alive treatment
> 0 20 A
> 3 12 A
> 5 10 A
> 8 7 A
> 10 7 A
> 15 5 A
> 20 5 A
>
> (time=0 is start of the experiment and initial number of individuals is
> alive=20; time=20 is end of experiment)
>
> If I don't misunderstood the survival documentation, always a survival
> object is required, i.e. created with function Surv(time, event)
>
> So I have to transform my data (assuming no censoring, event=0 is alive
> and event=1 is dead):
>
> time event treatment
> 20 0 A
> 20 0 A
> 20 0 A
> 20 0 A
> 20 0 A
> 15 1 A
> 15 1 A
> 8 1 A
> 8 1 A
> 8 1 A
> 5 1 A
> 5 1 A
> 3 1 A
> 3 1 A
> 3 1 A
> 3 1 A
> 3 1 A
> 3 1 A
> 3 1 A
> 3 1 A
>
> Is there a function or any other [R] code doing this?
>
> or
>
> Is it possible to perform survival analysis direct from
> population data set?
>
> Thanks for any help
> Jens
> --
> Jens Schmidt TU Dresden -Inst. f. Hydrobiologie-
> Tel. +49-(0)351-463-36284 Mommsenstrasse 13
> Fax +49-(0)351-463-37108 01062 Dresden
> R.F.A.
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