[R] Better idea than Poisson?
Jim Lindsey
james.lindsey at luc.ac.be
Fri Jan 25 16:18:33 CET 2002
>
> On Fri, 25 Jan 2002, Patrick Connolly wrote:
>
> >
> > My data has three factors, a discrete response and an offset column.
> > >From the summary of a glm object derived using three way interactions,
> > I get this deviance information:
> >
> > (Dispersion parameter for poisson family taken to be 1)
> >
> > Null deviance: 39244 on 896 degrees of freedom
> > Residual deviance: 11913 on 795 degrees of freedom
> > AIC: 13905
> >
> > Number of Fisher Scoring iterations: 6
> >
> >
> > The rather high residual deviance could indicate that the data does
> > not fit a poisson distrubution very well. That's believable since in
> > quite a number of combinations of the three factors, zero occurs more
> > often that one might expect for a Poisson distribution.
> >
> >
> > Are there suggestions as to what might be a better way to analyse this
> > data?
>
> I would at least try a negative binomial (glm.nb in MASS), but as that
> seems to be a very large degree of over-dispersion it might not fit much
> better. You could fairly easily write code for a zero-augmented Poisson
> (a mixture of a Poisson and always zero) by a direct likelihood
> maximization.
The zero-augmented Poisson regression is available in my fmr function,
and a number of different overdispersed binomial distribution
regressions, including negative binomial, are available in gnlr, all
in my gnlm library at www.luc.ac.be/~jlindsey/rcode.html
Jim
>
> --
> Brian D. Ripley, ripley at stats.ox.ac.uk
> Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/
> University of Oxford, Tel: +44 1865 272861 (self)
> 1 South Parks Road, +44 1865 272860 (secr)
> Oxford OX1 3TG, UK Fax: +44 1865 272595
>
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