[Rd] Fwd: Rstudio R-devel libR.so
Karim Mezhoud
kmezhoud at gmail.com
Mon Mar 9 17:49:29 CET 2015
Dear All,
I am actually on R-devel using shell consol. When I run RStudio, it can't
find libR.so in the new /lib folder where is libRblas.so libRlapack.so.
At first step I configure R-devel to share library with ./configure
--enable-R-shlib.
when I copied libR.so from /usr/lib/R/lib/libR.so (stable version R 3.1)
to /usr/local/R-devel/lib/libR.so (R-devel version), That doesn't work.
please find the detail at below.
Karim mezhoud
$which R
/usr/bin/R
$R
> R.Version()[13]
$version.string
[1] "R version 3.1.2 (2014-10-31)
> Sys.getenv("R_HOME")
[1] "/usr/lib/R"
> .Library
[1] "/usr/lib/R/library"
> .libPaths()
[1] "/home/mezhoud/R/x86_64-pc-linux-gnu-library/3.1"
[2] "/usr/local/lib/R/site-library"
[3] "/usr/lib/R/site-library"
[4] "/usr/lib/R/library"
"
$sudo apt-get build-dep r-base
$sudo apt-get install subversion ccache
$mkdir ~/svn/
$cd ~/svn/
$svn co https://svn.r-project.org/R/trunk r-devel/R
$cd /svn/r-devel/R
$./configure --enable-R-shlib
$make
$make check
$sudo make install rhome=/usr/local/R-devel
$which R
/usr/local/bin/R
$cd /usr/local/bin
$R
>R.Version()[13]
$version.string
[1] "R Under development (unstable) (2015-03-07 r67951)"
> .libPaths()
[1] "/usr/local/R-devel/library"
> .Library
[1] "/usr/local/R-devel/library"
> Sys.getenv("R_HOME")
[1] "/usr/local/R-devel"
$rstudio
R shared library (/usr/local/R-devel/lib/libR.so) not found.
If this is a custom build of R, was it built with the --enable-R-shlib
option?
$export RSTUDIO_WHICH_R=/usr/local/bin/R
$rstudio
R shared library (/usr/local/R-devel/lib/libR.so) not found.
If this is a custom build of R, was it built with the --enable-R-shlib
option?
$export RSTUDIO_WHICH_R=/usr/local/R-devel/bin/R
$rstudio
R shared library (/usr/local/R-devel/lib/libR.so) not found.
If this is a custom build of R, was it built with the --enable-R-shlib
option?
$sudo locate libR.so
/usr/lib/libR.so
/usr/lib/R/lib/libR.so
When I get a symbolic link with:
sudo ln -s /usr/lib/R/lib/libR.so /usr/local/R-devel//lib/libR.so
The R session had a fatal error.
ERROR r error 4 (R code execution error) [errormsg=Error in
.Internal(getOption(x)) :
there is no .Internal function 'getOption'
]; OCCURRED AT: core::Error r::exec::evaluateString(const std::string&,
SEXPREC**, r::sexp::Protect*) /home/ubuntu/rstudio/src/cpp/r/RExec.cpp:
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