[Rd] Bug in nlm, found using sem; failure in several flavors (PR#13883)

Mon Aug 10 21:52:24 CEST 2009

   A wild guess, based on some recent "non-deterministic" behavior in
lme4: could this be driven by a bug in optimized linear algebra libraries
(BLAS/LAPACK)?  (Unfortunately, I'm not clear on how to check the versions
of BLAS/LAPACK being used and whether they are subject to bugs,
but perhaps someone else can comment ...)

   Ben Bolker

Adam D. I. Kramer-2 wrote:
> 
>   This message is in MIME format.  The first part should be readable text,
>   while the remaining parts are likely unreadable without MIME-aware
> tools.
> 
> --1660387551-150661043-1249684349=:2997
> Content-Type: TEXT/PLAIN; charset=iso-8859-1; format=flowed
> Content-Transfer-Encoding: QUOTED-PRINTABLE
> 
> Hi Jeff,
> 
>  =09As mentioned in my message, I *did* replicate on another platform.=20
> One platform was running linux in a VM, the other running MacOSX, on two
> different physical machines.  The problem did not replicate on a PowerPC
> box, so if it is a bug with intel chips, I think it's also appropriate to
> report here given that the problem seems to cross the OS boundary.  I do
> no=
> t
> have access to a Windows machine.
> 
>  =09Also, I have spent a decent amount of time running memory testers on
> the first machine's memory, to ensure that physical memory is not a
> problem...the classic "memcheck" program finds no trouble.
> 
>  =09The CSV and .ram files both came through as base-64-encoded
> attachments, which you actually quoted back to me in your response,
> below...but in case your mail client can't read those and/or you are
> interested in this bug, I have pasted them at the end of this message
> (sinc=
> e
> they're quite small).
> 
>  =09And thanks for the shout-out for bacon. I bought this domain name in
> undergrad many years ago, and I must say, I've never regretted it!
> 
> --Adam
> 
> On Fri, 7 Aug 2009, Jeff Ryan wrote:
> 
>> Adam,
>>
>> It seems that your attachment didn't make it through.
>>
>> That aside, my experience with strange errors like those (random type
>> not implemented ones) has been that you may be looking at a memory
>> problem on you machine. Given that you can't replicate on another
>> platform (and the .csv file didn't come through), I would think it
>> wise to start there.
>>
>> My 2c.  And I love bacon too :)
>>
>> Jeff
>>
>> On Fri, Aug 7, 2009 at 1:10 PM, <adik at ilovebacon.org> wrote:
>>> =A0This message is in MIME format. =A0The first part should be readable
>>> =
> text,
>>> =A0while the remaining parts are likely unreadable without MIME-aware
>>> to=
> ols.
>>>
>>> --1660387551-1458482416-1249639718=3D:2997
>>> Content-Type: TEXT/PLAIN; CHARSET=3DUS-ASCII; FORMAT=3Dflowed
>>> Content-ID: <Pine.LNX.4.64.0908071039211.2997 at parser.ilovebacon.org>
>>>
>>> Hello,
>>>
>>> =A0 =A0 =A0 =A0There appears to be a bug in the nlm function, which I
>>> di=
> scovered
>>> when trying to run an SEM. =A0The SEM is not bizarre; the covariance
>>> mat=
> rix is
>>> solve-able and the eigenvalues are greater than zero, and I do not
>>> belie=
> ve
>>> the "sem" package per se to be the problem (as nlm keeps being the part
>>> =
> that
>>> fails, though I can't replicate this with other nlm tasks). =A0I
>>> apologi=
> ze if
>>> I have put too many much information in this message; I'm not a
>>> programm=
> er
>>> by trade so I don't really know what's going on here, which hampers my
>>> ability to write consise bug reports.
>>>
>>> Here is the code I use:
>>>
>>> library(sem)
>>> ice.S <- read.csv("iceS.csv") # attached
>>> rownames(ice.S) <- ice.S[,1]
>>> ice.S[,1] <- NULL
>>> ice.S <- as.matrix(ice.S)
>>> ice.ram <- specify.model("ice.ram") # attached
>>> ice.N <- 342
>>> ice.sem <- sem(ram=3Dice.ram, S=3Dice.S, N=3Dice.N)
>>>
>>> ...at this point, any number of problems could occur. I have seen the
>>> following.
>>>
>>> 1) Simple lack of convergence. (might be my model's fault.)
>>> 2) Error in nlm(if (analytic.gradient) objective.2 else objective.1,
>>> sta=
> rt,
>>> :
>>> =A0 type 31 is unimplemented in 'type2char'
>>> 3) =A0*** caught segfault ***
>>> address 0xc019c87b, cause 'memory not mapped'
>>>
>>> Traceback:
>>> =A01: nlm(if (analytic.gradient) objective.2 else objective.1, start,
>>> hessian =3D TRUE, iterlim =3D maxiter, print.level =3D if (debug) 2
>>> else=
>  0,
>>> typsize =3D typsize, ...)
>>> =A02: sem.default(ram =3D ram, S =3D S, N =3D N, param.names =3D pars,
>>> v=
> ar.names =3D
>>> vars, =A0 =A0 fixed.x =3D fixed.x, debug =3D debug, ...)
>>> =A03: sem(ram =3D ram, S =3D S, N =3D N, param.names =3D pars,
>>> var.names=
>  =3D vars,
>>> fixed.x =3D fixed.x, debug =3D debug, ...)
>>> =A04: sem.mod(ram =3D ice.ram, S =3D ice.S, N =3D ice.N)
>>> =A05: sem(ram =3D ice.ram, S =3D ice.S, N =3D ice.N)
>>>
>>> Possible actions:
>>> 1: abort (with core dump, if enabled)
>>> 2: normal R exit
>>> 3: exit R without saving workspace
>>> 4: exit R saving workspace
>>> Selection: 1
>>> aborting ...
>>> Segmentation fault
>>> swiss:data$
>>>
>>> (no core was dumped).
>>>
>>> Trying with debug mode provides other interesting errors:
>>>
>>>> ice.sem <- sem(ram=3Dice.ram, S=3Dice.S, N=3Dice.N, debug=3DTRUE)
>>>
>>> ...gets up to some iteration (not always 15), and then R dies
>>> ungraceful=
> ly,
>>> and exits to the shell:
>>>
>>> iteration =3D 15
>>> Step:
>>> =A0[1] =A01.253132e-02 =A01.183343e-02 -7.651342e-03 -2.490800e-03
>>> =A02.=
> 278938e-03
>>> =A0[6] =A03.197431e-04 =A06.137849e-04 -2.496882e-03 -1.065829e-03
>>> -2.11=
> 8179e-03
>>> [11] =A02.942936e-03 -1.335936e-03 -3.665618e-03 =A03.090566e-03
>>> =A08.53=
> 4956e-04
>>> [16] -1.440421e-03 -5.230877e-04 -1.053686e-04 -9.771005e-04
>>> -4.269216e-=
> 04
>>> [21] =A07.261694e-05 -1.039668e-03 -8.409151e-03 -3.497456e-03
>>> =A02.2168=
> 99e-03
>>> [26] -4.633520e-03 -4.052130e-03 -4.746537e-03 -1.589622e-03
>>> -2.523766e-=
> 04
>>> Parameter:
>>> =A0[1] -0.76604614 -1.19639662 =A00.83456888 =A00.72540413
>>> =A00.08482452=
>  =A00.56180393
>>> =A0[7] =A00.50615814 =A00.55728015 =A00.83796696 =A00.88371335
>>> -0.704651=
> 16 =A00.85251098
>>> [13] -0.18346956 =A00.66857787 =A00.57012481 =A00.39116561
>>> =A00.91237990=
>  =A00.63951482
>>> [19] =A00.26601566 =A00.29240836 =A00.44710919 =A00.94734056
>>> =A06.520390=
> 15 =A00.02524762
>>> [25] -0.01614603 =A02.88198219 =A00.03442452 =A03.52272237
>>> =A01.44698423=
>  -0.72964745
>>> Function Value
>>> [1] -15175.94
>>> Gradient:
>>> =A0[1] -2.085412e+07 -3.819717e+07 =A03.883989e+07 =A01.352594e+00
>>> -4.28=
> 3329e+00
>>> =A0[6] -1.437250e+00 -6.558913e-01 =A01.358276e+00 =A07.930865e+05
>>> -1.29=
> 3853e+06
>>> [11] -5.816627e+03 =A05.908197e+05 -2.705742e+08 -1.194400e+07
>>> -4.007083=
> e+07
>>> [16] -4.143068e+07 -6.159782e-01 =A01.044274e-01 -8.591048e+00
>>> -2.083471=
> e+00
>>> [21] -7.548753e-01 -5.418994e-01 -2.799228e+02 -1.321739e+07
>>> -3.517728e+=
> 07
>>> [26] -7.106654e+02 -7.335293e+06 -7.335285e+05 =A03.117764e-01
>>> -2.234989=
> e+04
>>>
>>> Abort trap
>>> swiss:data$
>>>
>>> ...I have also seen convergence reached, and nlm then die with this
>>> mess=
> age:
>>>
>>> Error in nlm(if (analytic.gradient) objective.2 else objective.1, start,
>>> :
>>> =A0 type 27 is unimplemented in 'type2char'
>>>
>>> (similar to above, but now referring to type 27)
>>>
>>> I have shown this effect (or something similar...never know how it'll
>>> fa=
> il
>>> next) on the following platforms:
>>>
>>>> version
>>> =A0 =A0 =A0 =A0 =A0 =A0 =A0 =A0_
>>> platform =A0 =A0 =A0 i386-apple-darwin9.7.0
>>> arch =A0 =A0 =A0 =A0 =A0 i386
>>> os =A0 =A0 =A0 =A0 =A0 =A0 darwin9.7.0
>>> system =A0 =A0 =A0 =A0 i386, darwin9.7.0
>>> status
>>> major =A0 =A0 =A0 =A0 =A02
>>> minor =A0 =A0 =A0 =A0 =A09.1
>>> year =A0 =A0 =A0 =A0 =A0 2009
>>> month =A0 =A0 =A0 =A0 =A006
>>> day =A0 =A0 =A0 =A0 =A0 =A026
>>> svn rev =A0 =A0 =A0 =A048839
>>> language =A0 =A0 =A0 R
>>> version.string R version 2.9.1 (2009-06-26)
>>>
>>>> sessionInfo()
>>> R version 2.9.1 (2009-06-26)
>>> i386-apple-darwin9.8.0
>>>
>>> locale:
>>> en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
>>>
>>> attached base packages:
>>> [1] stats =A0 =A0 graphics =A0grDevices utils =A0 =A0 datasets
>>> =A0method=
> s =A0 base
>>>
>>> other attached packages:
>>> [1] sem_0.9-17
>>>
>>> loaded via a namespace (and not attached):
>>> [1] tcltk_2.9.1 tools_2.9.1
>>>
>>> (I admit to having compiled this version of R myself (to link to a
>>> hand-compiled ATLAS), though no errors were thrown in the compilation
>>> st=
> age.
>>> I compiled using this config string, at first...
>>>
>>> ./configure --prefix=3D/usr/local --with-x --disable-R-framework
>>> --enabl=
> e-threads=3Dposix --with-blas=3D"/usr/local/lib/libptf77blas.a
> /usr/local/l=
> ib/libptcblas.a /usr/local/lib/libatlas.a -lpthread"
> --with-lapack=3D"/usr/=
> local/lib/liblapack.a /usr/local/lib/libptf77blas.a
> /usr/local/lib/libptcbl=
> as.a /usr/local/lib/libatlas.a -lpthread" --without-aqua CFLAGS=3D"-O3
> -mtu=
> ne=3Dnocona -m32" CXXFLAGS=3D"-O3 -mtune=3Dnocona -m32" FFLAGS=3D"-O3
> -mtun=
> e=3Dnocona -m32 -L/usr/lib/gcc/i686-apple-darwin9/4.2.1 -l gfortran"
> F77FLA=
> GS=3D"-O3 -mtune=3Dnocona -m32 -L/usr/lib/gcc/i686-apple-darwin9/4.2.1 -l
> g=
> fortran" FCFLAGS=3D"-O3 -mtune=3Dnocona -m32
> -L/usr/lib/gcc/i686-apple-darw=
> in9/4.2.1 -l gfortran" LDFLAGS=3D"-m32 -L/sw/lib"
> CPPFLAGS=3D"-I/sw/include=
> " CC=3Dgcc-4.2 F77=3Dgfortran-4.2 FC=3Dgfortran-4.2 CXX=3Dg++-4.2
> OBJC=3Dgc=
> c-4.2
>>>
>>> ...though I have also recompiled using simply this:
>>>
>>> ./configure --prefix=3D/usr/local --with-x --disable-R-framework
>>>
>>> ...and then re-installed SEM, and I got a few other, different error
>>> messages and core dumps, "including type 11 is unimplemented in
>>> 'type2ch=
> ar'"
>>> and "cannot coerce type 'weakref' to vector of type 'double'".
>>> =A0Runnin=
> g with
>>> debug=3DTRUE also segfaults sometimes, even after achieving "Current
>>> ite=
> rate
>>> is probably solution" status.)
>>>
>>>> version
>>> =A0 =A0 =A0 =A0 =A0 =A0 =A0 =A0_
>>> platform =A0 =A0 =A0 x86_64-unknown-linux-gnu
>>> arch =A0 =A0 =A0 =A0 =A0 x86_64
>>> os =A0 =A0 =A0 =A0 =A0 =A0 linux-gnu
>>> system =A0 =A0 =A0 =A0 x86_64, linux-gnu
>>> status
>>> major =A0 =A0 =A0 =A0 =A02
>>> minor =A0 =A0 =A0 =A0 =A09.1
>>> year =A0 =A0 =A0 =A0 =A0 2009
>>> month =A0 =A0 =A0 =A0 =A006
>>> day =A0 =A0 =A0 =A0 =A0 =A026
>>> svn rev =A0 =A0 =A0 =A048839
>>> language =A0 =A0 =A0 R
>>> version.string R version 2.9.1 (2009-06-26)
>>>
>>>> sessionInfo()
>>> R version 2.9.1 (2009-06-26)
>>> x86_64-unknown-linux-gnu
>>>
>>> locale:
>>> LC_CTYPE=3Den_US;LC_NUMERIC=3DC;LC_TIME=3Den_US;LC_COLLATE=3Den_US;LC_MO=
> NETARY=3DC;LC_MESSAGES=3Den_US;LC_PAPER=3Den_US;LC_NAME=3DC;LC_ADDRESS=3DC;=
> LC_TELEPHONE=3DC;LC_MEASUREMENT=3Den_US;LC_IDENTIFICATION=3DC
>>>
>>> attached base packages:
>>> [1] stats =A0 =A0 graphics =A0grDevices utils =A0 =A0 datasets
>>> =A0method=
> s =A0 base
>>>
>>> other attached packages:
>>> [1] sem_0.9-17
>>>
>>> ...however, THIS platform does NOT show the bug:
>>>
>>>> version
>>> =A0 =A0 =A0 =A0 =A0 =A0 =A0 =A0_
>>> platform =A0 =A0 =A0 powerpc-unknown-linux-gnu
>>> arch =A0 =A0 =A0 =A0 =A0 powerpc
>>> os =A0 =A0 =A0 =A0 =A0 =A0 linux-gnu
>>> system =A0 =A0 =A0 =A0 powerpc, linux-gnu
>>> status
>>> major =A0 =A0 =A0 =A0 =A02
>>> minor =A0 =A0 =A0 =A0 =A09.1
>>> year =A0 =A0 =A0 =A0 =A0 2009
>>> month =A0 =A0 =A0 =A0 =A006
>>> day =A0 =A0 =A0 =A0 =A0 =A026
>>> svn rev =A0 =A0 =A0 =A048839
>>> language =A0 =A0 =A0 R
>>> version.string R version 2.9.1 (2009-06-26)
>>>> sessionInfo()
>>> R version 2.9.1 (2009-06-26)
>>> powerpc-unknown-linux-gnu
>>>
>>> locale:
>>> LC_CTYPE=3Den_US.UTF-8;LC_NUMERIC=3DC;LC_TIME=3Den_US.UTF-8;LC_COLLATE=
> =3Den_US.UTF-8;LC_MONETARY=3DC;LC_MESSAGES=3Den_US.UTF-8;LC_PAPER=3Den_US.U=
> TF-8;LC_NAME=3DC;LC_ADDRESS=3DC;LC_TELEPHONE=3DC;LC_MEASUREMENT=3Den_US.UTF=
> -8;LC_IDENTIFICATION=3DC
>>>
>>> attached base packages:
>>> [1] stats =A0 =A0 graphics =A0grDevices utils =A0 =A0 datasets
>>> =A0method=
> s =A0 base
>>>
>>> other attached packages:
>>> [1] sem_0.9-17
>>>>
>>>
>>> ...for this system, the model simply repeatedly fails to converge,
>>> wheth=
> er
>>> debug is set or not.
>>>
>>> I have also tried altering my model. This has resulted in the same
>>> bugs,=
>  but
>>> instead of "every so often simply not converging," it actually
>>> converges=
>  and
>>> appears to be the model I asked R to solve...but this is rare.
>>>
>>> Please let me know if I can provide any other info.
>>>
>>> Cordially,
>>> Adam D. I. Kramer
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>>> MzEyMiwwLjAzMjE2OTMyODE5ODg2NjksMC4wNjQ2MzEyMzI2MTg3MDk2LDAu
>>> MDEwMjk0NTA4NTY1MTI0NiwtMC4wMTk2NzU5OTk3OTIzMDA5LC0wLjE3ODc2
>>> NTU2MzM1NDgyOCwwLjE1MTM0MzU2Nzc2MTg1OSwtMC4wMzM2NTU5MDYzMzA3
>>> ODM1LDAuMDkyOTA2MjI3OTMzNDg5OCwwLjE1OTczNTYxODQyMzMzNQ0KImlt
>>> cG9ydGFudCIsMC4zODUyNjY5NjUzNjI3NjEsMC4xOTEyNDExODMyMDMxMjks
>>> MC4yMzA1OTg5NTg1OTc1MjgsMC45NjQ0OTc4ODAzNDM2MSwwLjY0NzY1NzE0
>>> MTQ4ODM3NSwwLjUxNDE3NTk3NDU1NDExNCwtMC4xOTc1MDY3MDU5MTcxMjMs
>>> MC40NzQ3MjMzMzI0Njk4NzUsLTAuMTI5MDkxMzI5ODE2MjAxLC0wLjE4OTIy
>>> OTEyMzcwNTM0MSwtMC40NjIxOTU4MzkyNjUwMzUsMC4xMjQxNTgzMzk1Mjcz
>>> MjIsMC4xNjA2NjEzMDc0ODY1NTksLTAuMDg2NDU3MzcyNzQ2NjI2NSwtMC4w
>>> NjgzNjc0ODQyNDk4ODAxDQoiY29tcGxleCIsMC4xOTc2NDQ4MjQ2OTYzMjAs
>>> MC4wMDAxNzQ2MzA0MTc1NjQ2ODgsMC4wMzAyNjkyMTA2MTM1NDM5LDAuNjQ3
>>> NjU3MTQxNDg4Mzc1LDAuOTc2MzIxNjU1NzYyOTY4LDAuNzU0OTc4Nzc3MzA5
>>> NTUzLC0wLjI2MjM0MDQyNTgyNDA1MiwwLjY1NjcxNzUzMzM2MTE3NiwtMC4x
>>> NjA0MjcxMzk2NzMwMTgsLTAuMjM2MjEwODU2MDgzOTAyLC0wLjM4NTQ1MjEw
>>> MDA0NjYyMywwLjAyMzg3NzU3MjgyNzcxNTcsMC4zMjQ1MjU2NTMxNjQ1MDgs
>>> LTAuMjQwNjM0ODA0ODg3MDU1LC0wLjIzMzY5NjU1NDE4OTE2NA0KImRpZmZp
>>> Y3VsdCIsMC4xODMwNDEzMjQwNjIyOTgsMC4wMDM0MDg4NzExODA3MTI4Nyww
>>> LjAxNTU0NDcwNTU3ODMxMjIsMC41MTQxNzU5NzQ1NTQxMTQsMC43NTQ5Nzg3
>>> NzczMDk1NTMsMC45NTczMjQzNDE2NjE5NzIsLTAuMTgzMDA1NTg3NTUxNjI0
>>> LDAuNTIzMTgzOTkzODk3NjMyLC0wLjE5NzgzMzM1NDQzMDkwNywtMC4yMjg0
>>> MzQ3MTMwNjE3NzYsLTAuMjYzNTg3NzQ2MDIxMTc0LC0wLjA0NTM5NzEzNzc3
>>> MDA4NDUsMC4zMzAwNzU2NjY1MjY3NjEsLTAuMjM0NzA3NTE3Njc3NTg2LC0w
>>> LjIzOTEyNjk3MTQ4MDYyNQ0KIm9ubHlzZWxmIiwtMC4xNDY2MjYzNDcyMTk4
>>> NzksMC4wMDk2MzA1MDQ3NDM1ODAzNCwwLjAzMjE2OTMyODE5ODg2NjksLTAu
>>> MTk3NTA2NzA1OTE3MTIzLC0wLjI2MjM0MDQyNTgyNDA1MiwtMC4xODMwMDU1
>>> ODc1NTE2MjQsMC45NDc4NTI0MTU0NDM2NjMsLTAuMjY4MzMzOTc5Mjk1NjEy
>>> LDAuMDc4NzE5MTg3OTIxNTY1NCwwLjA4MDA1NTQ0MzA5MzgwMzYsMC4xNjM1
>>> OTUyNzc0OTg3NTgsLTAuMDA1MDcyNjg2MDg0MTc3MDQsLTAuMTYwMTM3NTQ1
>>> ODcxNDQ4LDAuMjExMjU3MjUyMjg3OTc5LDAuMTQ3ODg0MzUyNTg4NDk5DQoi
>>> bWFueWRpbWVuc2lvbnMiLDAuMTQ2MzU0MDI3Nzk3MTAxLDAuMDI4Mzg5NDM3
>>> MzMxNjY4NCwwLjA2NDYzMTIzMjYxODcwOTYsMC40NzQ3MjMzMzI0Njk4NzUs
>>> MC42NTY3MTc1MzMzNjExNzYsMC41MjMxODM5OTM4OTc2MzIsLTAuMjY4MzMz
>>> OTc5Mjk1NjEyLDAuOTQ5OTE3NjYyNjE2MTYsLTAuMTEzMjk1NjY3NDA4MTc3
>>> LC0wLjE4MTU3NjQ3MzE3MDc4NCwtMC4yNzkyOTg0MTcxNzcyNjEsMC4wNDQy
>>> NDgxMjM1MDgyNTI4LDAuMjU4MzQ5NzAyNDYwNjYzLC0wLjE5Njk5MzM0NjMz
>>> NzIxNCwtMC4yMjI1MzM5NTI2MzM0ODINCiJob3dtdWNoaW5mbyIsLTAuMTMy
>>> ODg3NTk2OTAyNTA2LDAuMDE4ODAyNzUzOTQ2MzI5OSwwLjAxMDI5NDUwODU2
>>> NTEyNDYsLTAuMTI5MDkxMzI5ODE2MjAxLC0wLjE2MDQyNzEzOTY3MzAxOCwt
>>> MC4xOTc4MzMzNTQ0MzA5MDcsMC4wNzg3MTkxODc5MjE1NjU0LC0wLjExMzI5
>>> NTY2NzQwODE3NywwLjk0NjcyMjc0NjEzNzQxNSwwLjcwNjk3NjAxNTU4MjIx
>>> OCwwLjA5MjMxOTI3MDQ0Mzk5MzQsMC4yMTMwMzIyNDI0NzMzMTUsLTAuMjA5
>>> ODgyNDMxNzY1MTEwLDAuMjM5MTI0NTUxNjI5NTU5LDAuMjE5MDc4MzUyODkw
>>> NjU3DQoiZXF1YWxpbmZvIiwtMC4xNzM5NjUwNjkxMTEwMjUsLTAuMDE1NzAy
>>> NjM4MTUxNTk4NSwtMC4wMTk2NzU5OTk3OTIzMDA5LC0wLjE4OTIyOTEyMzcw
>>> NTM0MSwtMC4yMzYyMTA4NTYwODM5MDIsLTAuMjI4NDM0NzEzMDYxNzc2LDAu
>>> MDgwMDU1NDQzMDkzODAzNiwtMC4xODE1NzY0NzMxNzA3ODQsMC43MDY5NzYw
>>> MTU1ODIyMTgsMC45NjQ1MTc1NjI3NzgzMjgsMC4xODA1MTczMjU3NTIzODcs
>>> MC4xNjM4NDQ2NDA0OTU5ODMsLTAuMjEzODA0NTUwMDQzMjM5LDAuMjU4MDMy
>>> MzIyODI0NTk5LDAuMTkxODIwNDQ3NDA0MzM1DQoiY291bGRhdm9pZCIsLTAu
>>> MjY4NDU5MTYyOTMwNTY3LC0wLjE0NTc5NTAwNjc0MTg4NCwtMC4xNzg3NjU1
>>> NjMzNTQ4MjgsLTAuNDYyMTk1ODM5MjY1MDM1LC0wLjM4NTQ1MjEwMDA0NjYy
>>> MywtMC4yNjM1ODc3NDYwMjExNzQsMC4xNjM1OTUyNzc0OTg3NTgsLTAuMjc5
>>> Mjk4NDE3MTc3MjYxLDAuMDkyMzE5MjcwNDQzOTkzNCwwLjE4MDUxNzMyNTc1
>>> MjM4NywwLjk2MzIzNzMwOTczMDcyNiwtMC4xMjAxMzAxOTYzOTI0MDYsLTAu
>>> MDY4OTY1OTY1NzA1NzA5MSwwLjE2NTUzMzIwODc0MzU0NywwLjE5MTQyMTEz
>>> NDE4OTY4Mg0KInBvc291dGNvbWUiLC0wLjA2NzgwOTUzNzUwNzYyMjIsMC4x
>>> NDIwMzQzOTY5MDY4NzksMC4xNTEzNDM1Njc3NjE4NTksMC4xMjQxNTgzMzk1
>>> MjczMjIsMC4wMjM4Nzc1NzI4Mjc3MTU3LC0wLjA0NTM5NzEzNzc3MDA4NDUs
>>> LTAuMDA1MDcyNjg2MDg0MTc3MDQsMC4wNDQyNDgxMjM1MDgyNTI4LDAuMjEz
>>> MDMyMjQyNDczMzE1LDAuMTYzODQ0NjQwNDk1OTgzLC0wLjEyMDEzMDE5NjM5
>>> MjQwNiwwLjkzOTEwNzcxNzE4NjM4NSwtMC4yOTEyNjIzOTE4Mjc2NzEsMC4y
>>> NTYyNzQxOTU5ODMwMDQsMC4zNDY0NDE0MTExMTYxNDcNCiJuZWdvdXRjb21l
>>> IiwwLjE4MDU0OTkyNTAyNDM3NywwLjAwOTgxNTM4Mzk4NDM0ODUxLC0wLjAz
>>> MzY1NTkwNjMzMDc4MzUsMC4xNjA2NjEzMDc0ODY1NTksMC4zMjQ1MjU2NTMx
>>> NjQ1MDgsMC4zMzAwNzU2NjY1MjY3NjEsLTAuMTYwMTM3NTQ1ODcxNDQ4LDAu
>>> MjU4MzQ5NzAyNDYwNjYzLC0wLjIwOTg4MjQzMTc2NTExMCwtMC4yMTM4MDQ1
>>> NTAwNDMyMzksLTAuMDY4OTY1OTY1NzA1NzA5MSwtMC4yOTEyNjIzOTE4Mjc2
>>> NzEsMC45NTI1NTI5NjU3OTY0MjEsLTAuMjIxOTE3MjIyOTMwMTksLTAuMjMx
>>> MDMyMDE0OTI3Mzk3DQoiY29udHJvbCIsLTAuMDQyMDg0NDM2NDAzNzg3NCww
>>> LjA3MDU4Njg3NTY1Mzk3MzIsMC4wOTI5MDYyMjc5MzM0ODk4LC0wLjA4NjQ1
>>> NzM3Mjc0NjYyNjUsLTAuMjQwNjM0ODA0ODg3MDU1LC0wLjIzNDcwNzUxNzY3
>>> NzU4NiwwLjIxMTI1NzI1MjI4Nzk3OSwtMC4xOTY5OTMzNDYzMzcyMTQsMC4y
>>> MzkxMjQ1NTE2Mjk1NTksMC4yNTgwMzIzMjI4MjQ1OTksMC4xNjU1MzMyMDg3
>>> NDM1NDcsMC4yNTYyNzQxOTU5ODMwMDQsLTAuMjIxOTE3MjIyOTMwMTksMC45
>>> Mzc2MDc1MzMxODY1NzYsMC4zMTI2NjQxOTk2MzE2MjANCiJkZXNpcmVkIiwt
>>> MC4wNzMwNTc3ODk2OTAyOTY3LDAuMTA4MDAwNDQ5MzI4MzEzLDAuMTU5NzM1
>>> NjE4NDIzMzM1LC0wLjA2ODM2NzQ4NDI0OTg4MDEsLTAuMjMzNjk2NTU0MTg5
>>> MTY0LC0wLjIzOTEyNjk3MTQ4MDYyNSwwLjE0Nzg4NDM1MjU4ODQ5OSwtMC4y
>>> MjI1MzM5NTI2MzM0ODIsMC4yMTkwNzgzNTI4OTA2NTcsMC4xOTE4MjA0NDc0
>>> MDQzMzUsMC4xOTE0MjExMzQxODk2ODIsMC4zNDY0NDE0MTExMTYxNDcsLTAu
>>> MjMxMDMyMDE0OTI3Mzk3LDAuMzEyNjY0MTk5NjMxNjIwLDAuOTYzMTMxNjM5
>>> NTYwMTA4DQo=3D
>>>
>>> --1660387551-1458482416-1249639718=3D:2997--
>>>
>>> ______________________________________________
>>> R-devel at r-project.org mailing list
>>> https://stat.ethz.ch/mailman/listinfo/r-devel
>>>
>>
>>
>>
>> --=20
>> Jeffrey Ryan
>> jeffrey.ryan at insightalgo.com
>>
>> ia: insight algorithmics
>> www.insightalgo.com
>>
> 
> CSV:
> 
> "","wasrightchoice","tellgood","tellbest","important","complex","difficult"=
> ,"onlyself","manydimensions","howmuchinfo","equalinfo","couldavoid","posout=
> come","negoutcome","control","desired"
> "wasrightchoice",0.96369773178963,0.292736321229647,0.289852808489117,0.385=
> 266965362761,0.197644824696320,0.183041324062298,-0.146626347219879,0.14635=
> 4027797101,-0.132887596902506,-0.173965069111025,-0.268459162930567,-0.0678=
> 095375076222,0.180549925024377,-0.0420844364037874,-0.0730577896902967
> "tellgood",0.292736321229647,0.955494246210856,0.757544193339566,0.19124118=
> 3203129,0.000174630417564688,0.00340887118071287,0.00963050474358034,0.0283=
> 894373316684,0.0188027539463299,-0.0157026381515985,-0.145795006741884,0.14=
> 2034396906879,0.00981538398434851,0.0705868756539732,0.108000449328313
> "tellbest",0.289852808489117,0.757544193339566,0.948593590912408,0.23059895=
> 8597528,0.0302692106135439,0.0155447055783122,0.0321693281988669,0.06463123=
> 26187096,0.0102945085651246,-0.0196759997923009,-0.178765563354828,0.151343=
> 567761859,-0.0336559063307835,0.0929062279334898,0.159735618423335
> "important",0.385266965362761,0.191241183203129,0.230598958597528,0.9644978=
> 8034361,0.647657141488375,0.514175974554114,-0.197506705917123,0.4747233324=
> 69875,-0.129091329816201,-0.189229123705341,-0.462195839265035,0.1241583395=
> 27322,0.160661307486559,-0.0864573727466265,-0.0683674842498801
> "complex",0.197644824696320,0.000174630417564688,0.0302692106135439,0.64765=
> 7141488375,0.976321655762968,0.754978777309553,-0.262340425824052,0.6567175=
> 33361176,-0.160427139673018,-0.236210856083902,-0.385452100046623,0.0238775=
> 728277157,0.324525653164508,-0.240634804887055,-0.233696554189164
> "difficult",0.183041324062298,0.00340887118071287,0.0155447055783122,0.5141=
> 75974554114,0.754978777309553,0.957324341661972,-0.183005587551624,0.523183=
> 993897632,-0.197833354430907,-0.228434713061776,-0.263587746021174,-0.04539=
> 71377700845,0.330075666526761,-0.234707517677586,-0.239126971480625
> "onlyself",-0.146626347219879,0.00963050474358034,0.0321693281988669,-0.197=
> 506705917123,-0.262340425824052,-0.183005587551624,0.947852415443663,-0.268=
> 333979295612,0.0787191879215654,0.0800554430938036,0.163595277498758,-0.005=
> 07268608417704,-0.160137545871448,0.211257252287979,0.147884352588499
> "manydimensions",0.146354027797101,0.0283894373316684,0.0646312326187096,0.=
> 474723332469875,0.656717533361176,0.523183993897632,-0.268333979295612,0.94=
> 991766261616,-0.113295667408177,-0.181576473170784,-0.279298417177261,0.044=
> 2481235082528,0.258349702460663,-0.196993346337214,-0.222533952633482
> "howmuchinfo",-0.132887596902506,0.0188027539463299,0.0102945085651246,-0.1=
> 29091329816201,-0.160427139673018,-0.197833354430907,0.0787191879215654,-0.=
> 113295667408177,0.946722746137415,0.706976015582218,0.0923192704439934,0.21=
> 3032242473315,-0.209882431765110,0.239124551629559,0.219078352890657
> "equalinfo",-0.173965069111025,-0.0157026381515985,-0.0196759997923009,-0.1=
> 89229123705341,-0.236210856083902,-0.228434713061776,0.0800554430938036,-0.=
> 181576473170784,0.706976015582218,0.964517562778328,0.180517325752387,0.163=
> 844640495983,-0.213804550043239,0.258032322824599,0.191820447404335
> "couldavoid",-0.268459162930567,-0.145795006741884,-0.178765563354828,-0.46=
> 2195839265035,-0.385452100046623,-0.263587746021174,0.163595277498758,-0.27=
> 9298417177261,0.0923192704439934,0.180517325752387,0.963237309730726,-0.120=
> 130196392406,-0.0689659657057091,0.165533208743547,0.191421134189682
> "posoutcome",-0.0678095375076222,0.142034396906879,0.151343567761859,0.1241=
> 58339527322,0.0238775728277157,-0.0453971377700845,-0.00507268608417704,0.0=
> 442481235082528,0.213032242473315,0.163844640495983,-0.120130196392406,0.93=
> 9107717186385,-0.291262391827671,0.256274195983004,0.346441411116147
> "negoutcome",0.180549925024377,0.00981538398434851,-0.0336559063307835,0.16=
> 0661307486559,0.324525653164508,0.330075666526761,-0.160137545871448,0.2583=
> 49702460663,-0.209882431765110,-0.213804550043239,-0.0689659657057091,-0.29=
> 1262391827671,0.952552965796421,-0.22191722293019,-0.231032014927397
> "control",-0.0420844364037874,0.0705868756539732,0.0929062279334898,-0.0864=
> 573727466265,-0.240634804887055,-0.234707517677586,0.211257252287979,-0.196=
> 993346337214,0.239124551629559,0.258032322824599,0.165533208743547,0.256274=
> 195983004,-0.22191722293019,0.937607533186576,0.312664199631620
> "desired",-0.0730577896902967,0.108000449328313,0.159735618423335,-0.068367=
> 4842498801,-0.233696554189164,-0.239126971480625,0.147884352588499,-0.22253=
> 3952633482,0.219078352890657,0.191820447404335,0.191421134189682,0.34644141=
> 1116147,-0.231032014927397,0.312664199631620,0.963131639560108
> 
> RAM:
> 
> important <-- challenge, NA, 1
> complex  <-- challenge, c.complex, NA
> difficult <-- challenge, c.difficult, NA
> manydimensions <-- challenge, c.manydimensions, NA
> couldavoid <-- challenge, c.couldavoid, NA
> onlyself <-- challenge, c.onlyself, NA
> 
> wasrightchoice <-- eval, NA, 1
> tellgood <-- eval, e.tellgood, NA
> tellbest <-- eval, e.tellbest, NA
> negoutcome <-- eval, e.negoutcome, NA
> 
> equalinfo <-- informed, NA, 1
> control <-- informed, i.control, NA
> desired <-- informed, i.desired, NA
> howmuchinfo <-- informed, i.howmuchinfo, NA
> posoutcome <-- informed, i.posoutcome, NA
> 
> wasrightchoice <-> wasrightchoice, wasrightchoiceV, NA
> tellgood <-> tellgood, tellgoodV, NA
> tellbest <-> tellbest, tellbestV, NA
> negoutcome <-> negoutcome, negoutcomeV, NA
> 
> onlyself <-> onlyself, onlyselfV, NA
> important <-> important, importantV, NA
> complex <-> complex, complexV, NA
> difficult <-> difficult, difficultV, NA
> manydimensions <-> manydimensions, manydimensionsV, NA
> couldavoid <-> couldavoid, couldavoidV, NA
> 
> equalinfo <-> equalinfo, equalinfoV, NA
> control <-> control, controlV, NA
> desired <-> desired, desiredV, NA
> howmuchinfo <-> howmuchinfo, howmuchinfoV, NA
> posoutcome <-> posoutcome, posoutcomeV, NA
> 
> eval <-> eval, evalV, NA
> challenge <-> challenge, challengeV, NA
> informed <-> informed, informedV, NA
> --1660387551-150661043-1249684349=:2997--
> 
> ______________________________________________
> R-devel at r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel
> 
> 

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