[Rd] ridit()
Wolfram Fischer
wolfram at fischer-zim.ch
Thu Mar 11 15:38:22 MET 2004
I have tried to encode a ridit function.
(cf. Bross IDJ: How to use ridit analyses.
In: Biometrics 1958(14): 18-38.
Application e.g.:
Goossen WTF. Exploiting the Nursing Minimum Data Set for the Netherlands.
In: Medinfo 2001 2001: 1334-1338.
http://cmbi.bjmu.edu.cn/2001/medinfo_2001/Papers/Ch16/Goossen.pdf.)
Questions and hints:
- Is there already a ridit function in R?
- Argument ``b.sel.attrs'' could be omitted.
- Perhaps there are more efficient ways than calculating:
viq.ridit <- apply( t( t(x) * vjq.ridit.attr ), 1, sum, na.rm=T ) /
apply( x, 1, sum, na.rm=T )
- There seems to be a problem with the recursive call of CALC.ridit()
when attr.groups is set to a dataframe with as many rows as there
are columns in x (third example).
(See also my question to R-help:
https://www.stat.math.ethz.ch/pipermail/r-help/2004-March/045915.html)
Examples:
- CALC.ridit()
- CALC.ridit( attr.groups=c('x','x','y','y') )
- CALC.ridit( attr.groups=data.frame( G1=c('1x','1x','1y','1y'), G2=c('2x','2x','2y','2z') ) )
Wolfram
CALC.ridit <- # x: columns=attributes, rows=cases
x= t( data.frame( row.names=c('I','II','III','IV' )
, A=c(20,8,2,0), B=c( 2,6,8,14), C=c(8,16,10,6) ) )
, sum.attr=NULL # vector with sum of cases per attributes
, attr.groups=NULL # separate calculation for groups of attributes
# e.g.: c('x','x','y','y')
, b.sel.attrs=NULL # selection of attributes
, na.ridit=NA # or: 0.5 (?)
){
if( ! is.null( b.sel.attrs ) ){
x <- x[,b.sel.attrs]
sum.attr <- sum.attr[b.sel.attrs]
}
if( is.null( sum.attr ) ){
if( is.vector( x ) ) sum.attr <- sum(x)
sum.attr <- apply( x, 2, sum, na.rm=T )
}
if( is.null( attr.groups ) ){
vjq.ridit.attr <-
( cumsum( sum.attr ) - sum.attr / 2 ) / sum( sum.attr, na.rm=T )
if( is.vector( x ) )
viq.ridit <- x * vjq.ridit.attr / x
else
viq.ridit <- apply( t( t(x) * vjq.ridit.attr ), 1, sum, na.rm=T ) /
apply( x, 1, sum, na.rm=T )
viq.ridit[ ! is.finite( viq.ridit ) ] <- na.ridit
viq.ridit
}else{
warning( 'This code branch is not testet enough.\n' )
as.data.frame.list( tapply( X=seq( 1 : ncol(x) )
, INDEX=attr.groups, simplify=T
, FUN=function( z ) CALC.ridit( x=x[,z], sum.attr=sum.attr[z] )
))
}
}
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