[ESS-bugs] ess-mode 16.04 [<unknown>]; browser() noes not pause execution in ESS
Federico Bonofiglio
bono at imbi.uni-freiburg.de
Wed Jun 22 16:52:10 CEST 2016
embeding a browser command in ESS does not pause execution of function.
Example:
prova <- function(x){ browser() ; x }
> prova(6)
Called from: prova(6)
Browse[1]>
[1] 6
This problem is new under my current settings. Things worked properly in
the past. Maybe ESS or EMACS need an upgrade ?
I have an R 3.3.0 version on a x86_64-pc-linux-gnu (64-bit) platform
Browser does work normally in other editors like Rstudio on the same
example or from Linux console by calling R.
Any suggestion well appreciated thanks.
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[ess-site.el]: ess-customize-alist=nil
[ess-site.el _2_]: ess-customize-alist=nil
(S): ess-s-versions-create making M-x defuns for
(R): ess-r-versions-create making M-x defuns for
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=t,
comint..sender=comint-simple-send
(ess-mode-1): ess-language=S, ess-dialect=R buf=glm.R
(ess-mode-1.5): alist=((ess-quit-function quote ess-quit:R)
(ess-send-region-function quote ess-send-region:R)
(ess-load-file-function quote ess-load-file:R)
(ess-build-load-command-function quote ess-build-load-command:R)
(ess-build-eval-command-function quote ess-build-eval-command:R)
(ess-local-customize-alist quote ess-r-customize-alist)
(ess-eldoc-function function ess-R-eldoc-function) (ess-dialect . R)
(ess-suffix . R) (ess-ac-sources quote (ac-source-R))
(ess-company-backends quote ((company-R-args company-R-objects
:sorted))) (ess-build-tags-command . rtags('%s', recursive = TRUE,
pattern = '\\.[RrSs](rw)?$',ofile = '%s')) (ess-traceback-command .
local({cat(geterrmessage(), "----------------------------------
", fill=TRUE);try(traceback(), silent=TRUE)})
) (ess-call-stack-command . traceback(1)
) (ess-build-eval-message-function function ess-r-build-eval-message)
(ess-dump-filename-template ess-replace-regexp-in-string S$ ess-suffix
ess-dump-filename-template-proto) (ess-build-help-command-function
function ess-r-build-help-command) (ess-help-web-search-command quote
ess-R-sos) (ess-mode-syntax-table . R-syntax-table)
(ess-mode-editing-alist . R-editing-alist) (ess-change-sp-regexp .
ess-R-change-sp-regexp) (ess-help-sec-regex . ess-help-R-sec-regex)
(ess-help-sec-keys-alist . ess-help-R-sec-keys-alist) (ess-loop-timeout
. ess-S-loop-timeout) (ess-cmd-delay . ess-R-cmd-delay)
(ess-function-pattern . ess-R-function-pattern) (ess-object-name-db-file
. ess-r-namedb.el) (ess-smart-operators . ess-R-smart-operators)
(inferior-ess-program . inferior-R-program-name)
(inferior-ess-objects-command . inferior-R-objects-command)
(inferior-ess-font-lock-keywords quote inferior-R-font-lock-keywords)
(inferior-ess-search-list-command . search()
) (inferior-ess-help-command . inferior-ess-r-help-command)
(inferior-ess-help-filetype) (inferior-ess-exit-command . q())
(inferior-ess-exit-prompt . Save workspace image? [y/n/c]: )
(inferior-ess-start-file) (inferior-ess-start-args . )
(ess-error-regexp-alist . ess-R-error-regexp-alist)
(ess-describe-object-at-point-commands quote
ess-R-describe-object-at-point-commands) (ess-STERM . iESS) (ess-editor
. R-editor) (ess-pager . R-pager) (prettify-symbols-alist quote ((<- .
8592) (<<- . 8606) (-> . 8594) (->> . 8608))) (ess-language . S)
(inferior-ess-exit-command . q()
) (inferior-ess-language-start eval inferior-S-language-start)
(comint-use-prompt-regexp . t) (comint-process-echoes . t)
(inferior-ess-primary-prompt . > ) (inferior-ess-secondary-prompt . + )
(comment-start . #) (ess-imenu-generic-expression .
ess-imenu-S-generic-expression) (comment-add . 1) (comment-start-skip .
#+ *) (comment-use-syntax . t) (comment-column . 40) (ess-no-skip-regexp
concat ^ *@\| (default-value (quote ess-no-skip-regexp)))
(inferior-ess-prompt . inferior-S-prompt) (ess-get-help-topics-function
function ess-s-get-help-topics-function) (ess-getwd-command . getwd()
) (ess-setwd-command . setwd('%s')
) (ess-funargs-command . .ess_funargs("%s")
) (fill-nobreak-predicate quote ess-inside-string-p)
(normal-auto-fill-function quote ess-do-auto-fill)
(ess-execute-screen-options-command . options(width=%d, length=99999)
))
(ess-mode-1.6): editing-alist=((paragraph-start concat \s-*$\|
page-delimiter) (paragraph-separate concat \s-*$\| page-delimiter)
(paragraph-ignore-fill-prefix . t) (require-final-newline .
mode-require-final-newline) (indent-line-function quote ess-indent-line)
(parse-sexp-ignore-comments . t) (ess-style . ess-default-style)
(ess-mode-syntax-table . S-syntax-table)
(add-log-current-defun-header-regexp . ^\(.+\)\s-+<-[
]*function) (ess-font-lock-keywords quote ess-R-font-lock-keywords)
(ess-font-lock-defaults ess--extract-default-fl-keywords
ess-R-font-lock-keywords) (font-lock-defaults quote
(ess-font-lock-defaults nil nil ((46 . w) (95 . w)))))
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=t,
comint..sender=comint-simple-send
Finished setting up ESS-mode.
ess-request-a-process: {beginning}
... request-a-process:
major mode ess-mode; current buff: glm.R; ess-language: S, ess-dialect: R
..start-process-specific: lang:dialect= S:R, current-buf=glm.R
(R): ess-dialect=R, buf=glm.R, start-arg=nil
current-prefix-arg=nil
(inf-ess 1): lang=S, dialect=R, tmp-dialect=R, buf=glm.R
(inf-ess 1.1): procname=R temp-dialect=R, buf-name=*R*
(inf-ess 2.0) Method #3
start=/home/bonofiglio/Documents/TESI/DOC/LIK_based/dissertation/my_template/R_scripts/one_covariate/
buf=*R*
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=t,
comint..sender=comint-simple-send
(inf-ess 2.1): ess-language=S, ess-dialect=R buf=*R*
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=t,
comint..sender=inferior-ess-input-sender
(i-ess 1): buf=*R*, lang=S, comint..echo=t,
comint..sender=inferior-ess-input-sender,
(i-ess end): buf=*R*, lang=S, comint..echo=t,
comint..sender=inferior-ess-input-sender,
(inf-ess 3.0): prog=R, start-args=--no-readline , echoes=t
Making Process...Buf *R*, :Proc R, :Prog R
:Args= --no-readline
Start File=nil
(inferior-ess: waiting for process to start (before hook)
(inferior-ess 3): waiting for process after hookload-ESSR cmd:
local({
source('/usr/share/ess/etc/ESSR/R/.load.R', local=TRUE) #define load.ESSR
load.ESSR('/usr/share/ess/etc/ESSR/R')
})
(R): inferior-ess-language-start=options(STERM='iESS',
str.dendrogram.last="'", editor='emacsclient', show.error.locations=TRUE)
... request-a-process: buf=glm.R
(ess-setq-vars-LOCAL): language=S, dialect=R, buf=nil, comint..echoes=t,
comint..sender=comint-simple-send
(ess-help '*help[R](browser)*' start ..
|--> nil [searching t]
Emacs : GNU Emacs 24.3.1 (x86_64-pc-linux-gnu, GTK+ Version 3.10.7)
of 2014-03-07 on lamiak, modified by Debian
Package: ess-mode 16.04 [<unknown>]
current state:
==============
(setq
ess-language "S"
ess-dialect "R"
ess-ask-for-ess-directory t
ess-ask-about-transfile nil
ess-directory nil
ess-keep-dump-files "always"
ess-source-directory "/tmp"
ess-use-ido t
ess-use-eldoc t
ess-use-tracebug t
ess-use-auto-complete t
ess-use-company t
ess-eval-visibly-p t
ess-can-eval-in-background nil
ess-local-process-name "R"
)
--
M.Sc. Federico Bonofiglio,
MEDIASRES Ph.D. student.
Institute of Medical Biometry Office:
and Statistics. Freiburg Center of Data
University Medical Center Freiburg. Analysis and Modelling.
Institute of Mathematics
and Physics,
Stefan-Meier-Str. 26 Eckerstr. 1
79104 Freiburg 79104 Freiburg
Germany
phone: +49/761/203-7706
fax: +49/761/203-7700
web: www.mediasres-itn.eu
www.imbi.uni-freiburg.de
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