[BioC] Package qvalue - can it be installed without TCL-TK support?

[Giuseppe Gallone]

John

thanks, I will try what you suggested.

Best wishes
Giuseppe

On 05/23/14 15:31, John Blischak wrote:
> A short-term solution would be to download the source code and just
> directly use the qvalue function.
>
>   wget
> http://bioconductor.org/packages/release/bioc/src/contrib/qvalue_1.38.0.tar.gz
>   tar xzf qvalue_1.38.0.tar.gz
>
> Then source the code in R:
> source("qvalue/R/qvalue.R")
>
> If you wanted to install, you could edit the source code. I'd imagine
> deleting the function qvalue.gui and removing the references to tcltk in
> the package DESCRIPTION and NAMESPACE would allow you to install it from
> source.
>
> John
>
>
> On Fri, May 23, 2014 at 7:44 AM, Giuseppe Gallone
> <giuseppe.gallone at dpag.ox.ac.uk <mailto:giuseppe.gallone at dpag.ox.ac.uk>>
> wrote:
>
>     Hi
>
>     I need the qvalue package however I don't need the TCL-TK interface.
>
>     My R installation was compiled without native TCL-TK support and it
>     is inconvenient for me atm to reinstall/replace etc to add support.
>
>     As a consequence, as it stands it seems I cannot get qvalue to work
>     on my system.
>
>     Does anybody know of a way to install and run qvalue excluding the
>     TCL-TK bindings?
>
>     Best regards
>     Giuseppe
>
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