[BioC] apply function on genomicsRanges ob

[Greg VOISIN [guest]]

Hello, 

Does the apply function exist for genomisRange object. Here , I don't talk about a genomicRangesList object but genomic Range.
Is it pertinent to implement it ?

Actually, I populate my gr object with a for loops : depending the position of the gene , I had some information in mcol( gr obj).
unsurprising, the for loop is totally unefficient.

Greg.
Lady Davis Institute 
Montreal

 -- output of sessionInfo(): 

> sessionInfo()
R version 3.0.1 (2013-05-16)
Platform: x86_64-redhat-linux-gnu (64-bit)

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=C                 LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] parallel  stats     graphics  grDevices utils     datasets  methods  
[8] base     

other attached packages:
[1] ade4_1.6-2          IRanges_1.20.7      BiocGenerics_0.10.0

loaded via a namespace (and not attached):
[1] stats4_3.0.1 tools_3.0.1 


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