[BioC] FRiP for ChIP-seq in Bioconductor?
Sidders, Benjamin
Benjamin.Sidders at pfizer.com
Tue Nov 5 15:19:55 CET 2013
Hi All,
It has been recommended for ChIP-seq experiments that the fraction of reads in peaks (FRiP) stat is a good QC measure [http://genome.cshlp.org/content/22/9/1813.full]. I can't seem to find a BioConductor package in which this is implemented – has anyone got any suggestions (other than rolling my own!)?
--
Dr Ben Sidders
@sidderb
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