[BioC] Problem with the oligo package for nimblegen analysis
woldham at partners.org
Fri Nov 1 19:26:23 CET 2013
I am by no means an expert, but ran across your post as I encountered the same
problem. While I was not able to fix it, I was able to find a work-around
by writing the phenodata to the expressionset after reading in the files.
I suspect the following would work in this case as well:
maqc <- read.xysfiles(xys.files)
phenoData(maqc) <- pd
I hope this works to get you through the example and hopefully someone
more knowledgeable about the Biobase changes that result in this error
will respond as well.
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