[BioC] Flow Cytometry Analysis with FlowCore
Telma Fernandes [guest]
guest at bioconductor.org
Wed Jul 3 13:10:52 CEST 2013
I wanna know how to do transformation of the channel four (FLH 4) without using the standard transformations offer by the flowCore package?
The values of the channel four are between 1 and 4096 and i need to convert in values between 1 and 246 with the rule 10^(x/1024).
Thank you.
-- output of sessionInfo():
R version 2.15.1 (2012-06-22)
Platform: i386-pc-mingw32/i386 (32-bit)
locale:
[1] LC_COLLATE=Portuguese_Portugal.1252 LC_CTYPE=Portuguese_Portugal.1252 LC_MONETARY=Portuguese_Portugal.1252
[4] LC_NUMERIC=C LC_TIME=Portuguese_Portugal.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] latticeExtra_0.6-24 RColorBrewer_1.0-5 flowViz_1.22.0 lattice_0.20-15 flowCore_1.24.2
[6] rrcov_1.3-3 pcaPP_1.9-49 mvtnorm_0.9-9995 robustbase_0.9-8 Biobase_2.18.0
[11] BiocGenerics_0.4.0
loaded via a namespace (and not attached):
[1] feature_1.2.8 graph_1.36.2 grid_2.15.1 hexbin_1.26.2 IDPmisc_1.1.17 KernSmooth_2.23-10
[7] ks_1.8.12 MASS_7.3-23 stats4_2.15.1 tools_2.15.1
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