[BioC] statistical test for time course data
Davide Cittaro
cittaro.davide at hsr.it
Tue Feb 5 07:23:32 CET 2013
On Feb 5, 2013, at 4:02 AM, Gordon K Smyth <smyth at wehi.edu.au> wrote:
> Dear Rich,
>
> I have added a time course example using splines to the limma User's
> Guide, see page 48:
>
> http://bioconductor.org/packages/2.12/bioc/vignettes/limma/inst/doc/usersguide.pdf
>
Does this work also for RNA-seq data?
d
> Best wishes
> Gordon
>
> ------------------ original message ------------------
> [BioC] statistical test for time course data
> Richard Friedman friedman at cancercenter.columbia.edu
> Sun Feb 3 20:18:03 CET 2013
>
> Dear Gordon,
>
> Thank you very much for the clarification. Now that I think of it,
> the one-against all is straightforward. However, If there are any worked
> examples you could point me towards for polynomial and spline modeling of
> the time series I would greatly appreciate it. I am especially interested
> in testing the hypothesis that the temporal behavior of 2 treatments are
> different.
>
> Best wishes,
> Rich
>
> ______________________________________________________________________
> The information in this email is confidential and intend...{{dropped:4}}
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at r-project.org
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
/*
Davide Cittaro, PhD
Coordinator of Bioinformatics Core
Center for Translational Genomics and Bioinformatics
Ospedale San Raffaele
Via Olgettina 58
20132 Milano
Italy
Office: +39 02 26439140
Mail: cittaro.davide at hsr.it
Skype: daweonline
*/
More information about the Bioconductor
mailing list