[BioC] edgeR DGEList

[Mark Robinson]

Jahn:  Load the package first …

library("edgeR")
dge <- DGEList(counts=cots)
…

Best, Mark


On 12.12.2013, at 09:35, Jahn Davik [guest] <guest at bioconductor.org> wrote:

> 
> Hi there,
> I am trying to import the counts data (='cots', count data set generated in Trinity) into R. When I run
> $ dge<-DGEList(counts=cots), I get the reply:
> 
> Error: could not find 'DGEList'
> 
> BTW: I start the session by 
> source("http://bioconductor.org/biocLite.R")
> biocLite("edgeR")
> biocLite("DESeq")
> 
> Probably trivial, but help is still greatly appreciated.
> Thanks.
> 
> jahn
> 
> 
> 
> 
> -- output of sessionInfo(): 
> 
> Error: could not find 'DGEList'
> 
> --
> Sent via the guest posting facility at bioconductor.org.
> 
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