[BioC] How to filter a list of genes by their ontology
Laurent Pays [guest]
guest at bioconductor.org
Mon Sep 17 17:15:33 CEST 2012
Hi,
After analysing my arrays for differentially expressed genes, I get a list of genes Id. To reduce even more the number of genes in this list, I would like to retain only genes related to the immune system. I've looked for packages dealing with "ontology" but I couldn't find any doing this simple task...
Any idea on what package/function I could use?
Thanks in advance for your help.
L.P
-- output of sessionInfo():
R version 2.7.0 (2008-04-22)
powerpc-apple-darwin8.10.1
locale:
fr_FR.UTF-8/fr_FR.UTF-8/C/C/fr_FR.UTF-8/fr_FR.UTF-8
attached base packages:
[1] stats graphics grDevices utils datasets methods base
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