[BioC] what is the threshold for R homology package

[Rachel [guest]]

I found no of homology pairs in R homology package is different from http://inparanoid.sbc.su.se/download/current/table_stats/

For example, there are 1804 homo-sapien-Spombe pairs in Hom.Hs.inp.db, inparanoid website claims,

5615 sequences H.sapiens.fa have homologs in dataset S.pombe.fa
2986 sequences S.pombe.fa have homologs in dataset H.sapiens.fa


May I know did you apply any cutoff for the homology pairs in R package?


 -- output of sessionInfo(): 

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