[BioC] help with mapping statistics summary

Leonor Carvalho lcarvalh at btk.fi
Tue May 22 10:31:24 CEST 2012


I am pretty new using the bioconductor and I have some RNAseq data on which I
had performed and TopHat and I need to perform a mapping summary statistics
from the results. I have a pretty large BAM file of accepted hits (aprox.

I´ve been looking at the bioconductor packages and I found the Rsamtools, that I
think maybe I can used to this propose, but can anyone give me any suggestion
of some other package or how could I do this statistics summary?



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