[BioC] EBImage in R-Cloud

Nicole [guest] guest at bioconductor.org
Tue Mar 13 08:54:51 CET 2012

How can I use EBImage on R-Cloud. It seems I have to install ImageMagic first, but how can I install it on R-Cloud?

 -- output of sessionInfo(): 

Using R version 2.13.0, biocinstall version 2.8.4.
Installing Bioconductor version 2.8 packages:
[1] "EBImage"
Please wait...

Installing package(s) into '/net/nas20/rcloud_data/storage/wdir/...../RLibs'
(as 'lib' is unspecified)
trying URL 'http://mirrors.ebi.ac.uk/bioconductor/packages/2.8/bioc/src/contrib/EBImage_3.8.0.tar.gz'
Content type 'application/x-gzip' length 5258014 bytes (5.0 Mb)
opened URL
downloaded 5.0 Mb

checking for Magick-config... no
configure: error: "ImageMagick or ImageMagick includes not found!"

The downloaded packages are in
Warning message:
In install.packages(pkgs = pkgs, repos = repos, ...) :
  installation of package 'EBImage' had non-zero exit status

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