[BioC] gplots error

[Dan Tenenbaum]

On Thu, Jun 7, 2012 at 5:58 AM, German Gonzalez [guest]
<guest at bioconductor.org> wrote:
>
> Yesterday a new version gdata package (2.8.2) was released. After upgrading the package, gplots stopped working.
>
> Error : object ‘nobs’ is not exported by 'namespace:gdata'
> ERROR: lazy loading failed for package ‘gplots’
>
> The only way I had to fix this was to uninstall both packages and install an older version manually.
>

Our build machines have gdata 2.10.0 installed. The "new" version of
gdata is 2.8.2.

According to R, 2.8.2 is not newer than 2.10.0:

> package_version("2.8.2") > package_version("2.10.0")
[1] FALSE

Hence gdata was not updated on our build machines. I will update it manually.
Many packages were affected, in devel and release; they ought to be
corrected by mid-morning tomorrow Seattle time.

Thanks,
Dan



> Regards
>
>
>  -- output of sessionInfo():
>
> R version 2.14.1 (2011-12-22)
> Platform: x86_64-unknown-linux-gnu (64-bit)
>
> locale:
>  [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C
>  [3] LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8
>  [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8
>  [7] LC_PAPER=C                 LC_NAME=C
>  [9] LC_ADDRESS=C               LC_TELEPHONE=C
> [11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
>
> attached base packages:
> [1] grid      stats     graphics  grDevices utils     datasets  methods
> [8] base
>
> other attached packages:
> [1] gdata_2.8.2       gtools_2.6.2
>
>
> --
> Sent via the guest posting facility at bioconductor.org.
>
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