[BioC] ChIPpeakAnno to find peaks nearest to miRNA

Holly xyang2 at uchicago.edu
Mon Dec 10 17:12:08 CET 2012


Hi, Jianrong,

Do you think I can use ChIPpeakAnno to get both sided genes for a peak 
region?
If so, how do you suggest, using both the TSS and TTS, or use both the 
5UTR and 3UTR?

Thanks a lot,
Holly



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