[BioC] mzR Error

[Laurent Gatto]

On 7 December 2012 11:10, Prasad Phapale <pphapale at gmail.com> wrote:
> Thanks,
> I used new binary packages of mzR, version 1.5.4 (devel) and worked fine
> with 32 bit system. But my R is getting crashed.
> So, I switched to 64 bit PC and it works. But my 32 bit system still get
> crashed for R with this.

And is this crashing anyhow related to mzR or any other Bioc package?
The tests I have done are on a 32 bit system and I did not experience
any such inconvenience.

Laurent

> Anyway thanks I am working with 64 bit system and its fine.
> Thanks a lot.
>
>
> On Fri, Dec 7, 2012 at 3:16 PM, Laurent Gatto <lg390 at cam.ac.uk> wrote:
>>
>> On 6 December 2012 19:56, Laurent Gatto <lg390 at cam.ac.uk> wrote:
>> > Dear Prasad,
>> >
>> > New binary packages of mzR, version 1.5.4 (devel) and 1.4.2 (stable),
>> > that have been built against Rcpp 0.10.1 are available via biocLite.
>> > Could you update as follows
>> >
>> > library(BiocInstaller)
>> > biocLite("mzR")
>> >
>> > which should fix the problem.
>>
>> According to my local tests, this is fixed with the above mentioned
>> mzR versions.
>>
>> Laurent
>>
>> > Best wishes,
>> >
>> > Laurent
>> >
>> > On 6 December 2012 11:21, Prasad Phapale [guest]
>> > <guest at bioconductor.org> wrote:
>> >>
>> >> Dear All,
>> >> I am getting error for mzR constantly. Please help out.
>> >>> library(Biobase)
>> >>> library(BiocGenerics)
>> >>> library(methods)
>> >>> library(Rcpp)
>> >>> library(mzR)
>> >> Error : .onLoad failed in loadNamespace() for 'mzR', details:
>> >>   call: value[[3L]](cond)
>> >>   error: failed to load module Ramp from package mzR
>> >> negative length vectors are not allowed
>> >>
>> >> Error: package or namespace load failed for ‘mzR’
>> >>
>> >>  -- output of sessionInfo():
>> >>
>> >>
>> >> R Under development (unstable) (2012-12-01 r61188)
>> >> Platform: i386-w64-mingw32/i386 (32-bit)
>> >>
>> >> locale:
>> >> [1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United
>> >> States.1252    LC_MONETARY=English_United States.1252
>> >> [4] LC_NUMERIC=C                           LC_TIME=English_United
>> >> States.1252
>> >>
>> >> attached base packages:
>> >> [1] parallel  stats     graphics  grDevices utils     datasets  methods
>> >> base
>> >>
>> >> other attached packages:
>> >> [1] Rcpp_0.10.1        Biobase_2.19.1     BiocGenerics_0.5.1
>> >>>
>> >>
>> >> --
>> >> Sent via the guest posting facility at bioconductor.org.
>> >>
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>> >