[BioC] Parallelizing Biostrings::pairwiseAlignment locally with multicore::mclapply problems?
Steve Lianoglou
mailinglist.honeypot at gmail.com
Tue Apr 17 18:10:14 CEST 2012
Aaaaannd ... please ignore this thread.
I just restarted an R session w/ only my data, Biostrings, and
multicore loaded and this warning is now gone.
Still not sure how that warning was being emitted, but sometimes
ignorance is bliss.
-steve
On Tue, Apr 17, 2012 at 12:02 PM, Steve Lianoglou
<mailinglist.honeypot at gmail.com> wrote:
> Sorry, I included the wrong package info from sessionInfo:
>
>> R version 2.15.0 (2012-03-30)
>> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
>>
>> other attached packages:
>> Rmpi_0.5-9
>> Biostrings_2.25.1
>
> Rmpi isn't really relevant and should have included:
>
> multicore_0.1-7
>
>
> --
> Steve Lianoglou
> Graduate Student: Computational Systems Biology
> | Memorial Sloan-Kettering Cancer Center
> | Weill Medical College of Cornell University
> Contact Info: http://cbio.mskcc.org/~lianos/contact
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact
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