[BioC] problem getting setNodeColorRule from RCytoscape to work
Tony
tonyatvt at gmail.com
Tue Apr 3 17:19:42 CEST 2012
Paul Shannon <pshannon at ...> writes:
>
> Hi Tony,
>
> It looks like a version problem. Could you send the results of sessionInfo
()? Include, too, please, the
> version of Cytoscape you are running, and which version of Jan Bot's
CytoscapeRPC plugin. I'll bet we can
> figure it out quickly.
>
> - Paul
>
Hi Paul,
Thanks so much for your timely response. Here is the sessioninfo():
> sessionInfo ()
R version 2.14.2 (2012-02-29)
Platform: x86_64-pc-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=C LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] RCytoscape_1.4.4 XMLRPC_0.2-4 graph_1.32.0
loaded via a namespace (and not attached):
[1] RCurl_1.6-7 tools_2.14.2 XML_3.9-4
>
My Cytoscape version is 2.7.0, CytoscapeRPC is version 1.8 downloaded from
http://chianti.ucsd.edu/cyto_web/plugins/displayplugininfo.php?name=CytoscapeRPC
Thank you for your help!
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