[BioC] SNP 6 chip

[cstrato]

Dear Jim,

Thank you for mentioning xps, however xps does only work for expression 
arrays and not for mapping arrays such as SNP6.

Best regards
Christian


On 10/19/11 10:51 PM, James W. MacDonald wrote:
> Hi John,
>
> On 10/19/2011 2:27 PM, John linux-user wrote:
>> Hello,
>>
>> Can you please suggest R packages for analyzing affy SNP 6 and 250K as
>> well as copy number variations for sequencing data? Thanks.
>
> The oligo package will do this (although I don't know if it can do the
> CNV part). You might also look at xps.
>
> Best,
>
> Jim
>
>
>>
>> John
>> [[alternative HTML version deleted]]
>>
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