[BioC] how to update a bioconductor package
Hervé Pagès
hpages at fhcrc.org
Fri Oct 7 20:00:33 CEST 2011
Hi Shangao,
So where are we on this? Did you manage to update to the latest version
of Biostrings? Do you still see the trimLRPatterns bug?
Thanks,
H.
PS: Please don't forget to hit "Reply All". Thanks!
On 11-10-06 08:55 AM, Sean Davis wrote:
> On Thu, Oct 6, 2011 at 11:48 AM, wang peter<wng.peter at gmail.com> wrote:
>> thank you sean, thank you very much
>> they already fix the bug in the new version of Biostring
>>
>> this is the bug
>>
>> serSEW(width(x), start = start, end = end, width = width) :
>> solving row 1: 'allow.nonnarrowing' is FALSE and the supplied start (0) is
>> < 1
>
> Yes. We are working on that problem on another email, are we not?
> Let's deal with the problem one step at a time, OK?
>
> Sean
>
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--
Hervé Pagès
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
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