[BioC] Bioconductor does not install properly
Bas Jansen
bjhjansen at gmail.com
Thu Nov 24 11:47:49 CET 2011
Dear fellow Bioconductor users:
This is the message I get when I try to install Bioconductor as
instructed on the website:
"Warning message:
In getDependencies(pkgs, dependencies, available, lib) :
packages ‘affy’, ‘affydata’, ‘affyPLM’, ‘affyQCReport’, ‘annaffy’,
‘annotate’, ‘Biobase’, ‘biomaRt’, ‘Biostrings’, ‘DynDoc’, ‘gcrma’,
‘genefilter’, ‘geneplotter’, ‘GenomicRanges’, ‘hgu95av2.db’, ‘limma’,
‘marray’, ‘multtest’, ‘vsn’ are not available (for R version 2.14.0)"
Am I overlooking something?
Thanks for any help, and kind regards,
Bas
> sessionInfo()
R version 2.14.0 (2011-10-31)
Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit)
locale:
[1] C/UTF-8/C/C/C/C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] BiocInstaller_1.2.1
loaded via a namespace (and not attached):
[1] tools_2.14.0
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