[BioC] IlluminaHumanMethylation27k.db crashes!!

[Vincent Carey]

Please read the posting guide.  What is the error message?  What is
the result of sessionInfo()?

On Thu, May 5, 2011 at 5:35 PM, Jasreet <jovialj86 at gmail.com> wrote:
> I am new to R and trying to analyze Illumina Infinium Array Data using
> 'lumi' package.
> But whenever I try to load MethylumiM into annotation/color info using
> IlluminaHumanMethylation27k.db , its been crashing consistently!
> Using R for MacOSX.
> Command I used:
>
>>addColorChannelInfo <- lumiMethyR(myFile,
> lib="IlluminaHumanMethylation27k.db")
>
> Here are the contents of the MethyLumiM object :
>>myFile
> MethyLumiM (storageMode: lockedEnvironment)
> assayData: 485577 features, 12 samples
>  element names: detection, exprs, methylated, unmethylated
> protocolData: none
> phenoData
>  sampleNames: 3y0eY1 3y0eY2 ... 3y0eXY (12 total)
>  varLabels: sampleID label
>  varMetadata: labelDescription
> featureData
>  featureNames: cg00000029 cg00000108 ... rs9839873 (485577 total)
>  fvarLabels: TargetID ProbeID_A ProbeID_B
>  fvarMetadata: labelDescription
> experimentData: use 'experimentData(object)'
>
> Thanks!
> J
>
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