[BioC] meta-analysis

Steve Lianoglou mailinglist.honeypot at gmail.com
Fri Jan 14 05:03:01 CET 2011


Peevi:

(1) please keep all correspondence on list so that all may benefit
from any help provided; and

On Thu, Jan 13, 2011 at 10:50 PM, Peevi Ijkl <ipeevi at yahoo.com> wrote:
> sorry..yes it showed up at the end of the code that i posted

(2) Sorry, I'm lost. I don't really see how that can be the case.

Are you perhaps `source`-ing an entire file or something and therefore
missing where the error is happening. Or trying to copy a code chunk
from a text editor, and pasting it all into an R session? Or are you
really running each line out at a time and waiting for each result
before you try to run the next line?

You're saying that after you run this line:

##Select the 1st 100 probsets
R> resT7561<-resT[1:100,]
R> resT7561

You get this error:

>> Error in function (classes, fdef, mtable)  :
>>  unable to find an inherited method for function "exprs", for signature
>> "data.frame"

?

-- 
Steve Lianoglou
Graduate Student: Computational Systems Biology
 | Memorial Sloan-Kettering Cancer Center
 | Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact



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