[BioC] pdf report in ShortRead
Kavita Garg [guest]
guest at bioconductor.org
Fri Dec 30 00:01:16 CET 2011
Is there a way to print the report in pdf format ? I tried the following and got an error.
thanks
kavita
>class(qa)
[1] "ShortReadQQA"
attr(,"package")
[1] "ShortRead"
>rpt <- report(qa,dest = "REPORT.pdf", type = "pdf")
Error: UserArgumentMismatch
'report, type="pdf"' not implemented for class 'ShortReadQQA'
-- output of sessionInfo():
R version 2.13.2 (2011-09-30)
Platform: x86_64-unknown-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=C LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] ShortRead_1.10.4 Rsamtools_1.4.3 lattice_0.19-33
[4] Biostrings_2.20.4 GenomicRanges_1.4.6 IRanges_1.10.4
loaded via a namespace (and not attached):
[1] Biobase_2.12.2 grid_2.13.2 hwriter_1.3 multicore_0.1-7
--
Sent via the guest posting facility at bioconductor.org.
More information about the Bioconductor
mailing list