[BioC] plotMDS.dge error

[Gordon K Smyth]

Dear Bruce,

The plotMDS function edgeR and been improved and simplified in edgeR so 
that you now just type:

   plotMDS(d5, etc)

Best wishes
Gordon

> Date: Thu, 8 Dec 2011 16:30:09 -0000
> From: "Bruce Moran\(External\)" <Bruce.Moran at teagasc.ie>
> To: <bioconductor at r-project.org>
> Subject: [BioC] plotMDS.dge error
>
> Hi,
>
>
>
> I am getting an error when  trying to run plotMDS.dge in R_2.14:
>
>
>
>> pdf(file="no.Zero.MDS_plot.pdf")
>
>> plotMDS.dge(d5, main="MDS Plot for Data",xlim=c(-.8,.8),
> ylim=c(-.5,.5))
>
>
>
> Error: could not find function "plotMDS.dge"
>
>
>
> Is there any known reason for this? I believe the devel version was
> installed on the cluster I am working on, and besides this all other
> commands are working.
>
>
>
> Bruce.


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