[BioC] edgeR on microRNA data

[David Fredman]

Helena Persson <helena.persson at ...> writes:

> Well, I installed the devel version of R, but if I then do:
> 
> > source("http://www.bioconductor.org/biocLite.R")
> > biocLite("edgeR")
> 
> I get the error message:
> 
> Using R version 2.14.0, biocinstall version 2.8.4.
> Installing Bioconductor version 2.8 packages:
> [1] "edgeR"
> Please wait...
> 
> Warning: unable to access index for repository 
http://bioconductor.org/packages/2.8/bioc/bin/macosx/leopard/contrib/2.14
> ... so I guess I am doing something wrong.
> 

I had the same issue (with any Bioconductor package) .
The problem was an outdated biocLite() function. 
Run 'rm(biocLite)' and try again.

Best,
David