[BioC] grid.chromosome in quantsmooth, without cytobands?
Paul Shannon
pshannon at systemsbiology.org
Fri Oct 22 23:01:07 CEST 2010
I am very keen to use the grid.chromosome function in the bioc package quantsmooth.
I'd like the karyograms to be rendered *without* cytobands -- so that the interior of each idiogram is available for me to plot other data into.
I notice that there is a 'bands' argument to grid.chromosome, with expected value of either 'major' or 'minor'. Would it be possible to support a third option, 'none'?
Thanks!
- Paul
--- sample code
library (quantsmooth)
grid.newpage ()
grid.chromosome (22, units="bases", height=0.15, width = 0.5, cex.leg=1.5, bands='major')
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