[BioC] miRNA normalization using affy package?

Michal Blazejczyk michal.blazejczyk at mail.mcgill.ca
Fri Nov 5 15:11:06 CET 2010


Hi everyone,

I'm curious to hear what R packages you would recommend for
the normalization of data from Affymetrix miRNA arrays?
Is the standard affy package performing well?
What CDF package is best to use?

Best regards,

Michal Blazejczyk
FlexArray Lead Developer
McGill University and Genome Quebec Innovation Centre



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