[BioC] How to make my own GO.db?

[Marc Carlson]

Hi Rae,

Are you looking for the GO.db package?

http://www.bioconductor.org/packages/release/data/annotation/html/GO.db.html


  Marc



On 06/25/2010 02:06 PM, Xiaohui Wu wrote:
> Hi all,
>
> There are some GO databases 'org.Hs.eg.db' available in Biocondutor, which can be used in some R packages like goProfiles. But I need to analyse the GO terms in Chlamy, and no corresponding GO db can be found. 
>
> Is there any document describing how to make GO db, I googled, but none was found. Or, is there any other way like using perl to relate the GO terms and genes and do some hypothesis tests between two groups of genes?
>
> Thanking you,
>
> Rae
>
> 	[[alternative HTML version deleted]]
>
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
>
>