[BioC] no array platform for GOstats

Heidi Dvinge heidi at ebi.ac.uk
Mon Jun 7 18:44:05 CEST 2010


Hello Yu,

you can use the organism package, "org.Hs.eg.db" instead.

HTH
\Heidi

On 6 Jun 2010, at 12:20, Yuan Jian wrote:

> Hello,
>
> I have a gene set (represented in gene symbols) in human, can I  
> found reriched GO term using GOstates?
> I have read all documents, which tell me how to create params from  
> microarray data using
> params <- new("GOHyperGParams", ....). in my case, I do not have  
> microarry platform.
>
> thanks
> Yu
>
>
>
>
>
> 	[[alternative HTML version deleted]]
>
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