[BioC] EBImage installation on Mac OS X 10.6

[Gregoire Pau]

Hello Milan,

 > Library not loaded: /usr/local/lib/libMagick.10.dylib

If you used MacPorts to install ImageMagick then libMagick is located in 
/opt/local/ ... and not in /usr/local/lib. It looks like you are using 
the binary EBImage Mac package. Please download and compile the *source* 
package (.tar.gz) instead, from:
http://www.bioconductor.org/packages/release/bioc/html/EBImage.html

We are currently working on a new version of EBImage based on Qt, which 
will be much easier to install.

Best regards,

Greg
---
Gregoire Pau
EMBL Research officer
http://www.ebi.ac.uk/~gpau/


Milan Esner wrote:
>  Hi,
>  I have some difficulties with installing EBImage package to my R running on Mac OS X 10.6.
>  
>  I am currently running  R
>  
>  sessionInfo()
> R version 2.10.1 (2009-12-14) 
> i386-apple-darwin9.8.0 
> 
> locale:
> [1] en_US.UTF-8/en_US.UTF-8/C/C/en_US.UTF-8/en_US.UTF-8
> 
> attached base packages:
> [1] stats     graphics  grDevices utils     datasets  methods   base     
> 
> other attached packages:
> [1] abind_1.1-0
> 
> loaded via a namespace (and not attached):
> [1] tools_2.10.1
> 
> on Mac OS X 10.6.1.
> 
>  I followed all the installation, I installed MacPort, GTK2+ and Imagemagick. On the command line Image magick works, but if I want to load EBIimage in R I have this error message:
> 
>  library(EBImage)
> Error in dyn.load(file, DLLpath = DLLpath, ...) : 
>   unable to load shared library '/Users/esner/Library/R/2.10/library/EBImage/libs/i386/EBImage.so':
>   dlopen(/Users/esner/Library/R/2.10/library/EBImage/libs/i386/EBImage.so, 6): Library not loaded: /usr/local/lib/libMagick.10.dylib
>   Referenced from: /Users/esner/Library/R/2.10/library/EBImage/libs/i386/EBImage.so
>   Reason: image not found
> Error: package/namespace load failed for 'EBImage'
> 
> 
>  Could someone help. Thanks a lot.
> 
>    Milan
>  
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor