[BioC] Fwd: cannot install SNPlocs.Hsapiens.dbSNP.20090506

[Hervé Pagès]

Hi Dan,

Thanks for reporting this.

At the time I made SNPlocs.Hsapiens.dbSNP.20090506 (back in June 2009),
I dropped it in BioC release (BioC 2.4 at that time) but I apparently
forgot to drop it in devel (BioC 2.5). Then, in October, when BioC
2.5 became the current release, the package was still missing.
I've just added the source tarball to BioC 2.5 and BioC 2.6 and it
should become available via biocLite() in the next hour.

(Binary versions for Windows and Mac should follow in the next couple of
days.)

Please, let me know if you find anything else.

Cheers,
H.


Dan Strumpf wrote:
> Thanks for your prompt replies Sean and James.
> I've got the package information from a previous mailing list message by 
> Herve Pages (the one you've pointed out, Sean), and therefore I thought 
> it should be available.
> 
> Dan
> 
> 
> Sean Davis wrote:
>> Forgot to cc group on this....
>>
>>
>> ---------- Forwarded message ----------
>> From: Sean Davis <seandavi at gmail.com>
>> Date: Mon, Jan 11, 2010 at 11:27 AM
>> Subject: Re: [BioC] cannot install SNPlocs.Hsapiens.dbSNP.20090506
>> To: Dan Strumpf <dstrumpf at uhnresearch.ca>
>> Cc: Herve Pages <hpages at fhcrc.org>, Marc Carlson <mcarlson at fhcrc.org>
>>
>>
>> On Mon, Jan 11, 2010 at 10:23 AM, Dan Strumpf 
>> <dstrumpf at uhnresearch.ca> wrote:
>>> Hi,
>>> received these messagages when trying to install
>>>
>>> SNPlocs.Hsapiens.dbSNP.20090506
>>
>> I don't see this one in the repository for Bioc 2.5?  However, it
>> looks from this message that it should be available:
>>
>> https://stat.ethz.ch/pipermail/bioconductor/2009-June/027982.html
>>
>> I've cc'ed Herve Pages to see if he has any ideas.
>>
>> Sean
>>
>> _______________________________________________
>> Bioconductor mailing list
>> Bioconductor at stat.math.ethz.ch
>> https://stat.ethz.ch/mailman/listinfo/bioconductor
>> Search the archives: 
>> http://news.gmane.org/gmane.science.biology.informatics.conductor
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at stat.math.ethz.ch
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: 
> http://news.gmane.org/gmane.science.biology.informatics.conductor

-- 
Hervé Pagès

Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Ave. N, M2-B876
P.O. Box 19024
Seattle, WA 98109-1024

E-mail: hpages at fhcrc.org
Phone:  (206) 667-5791
Fax:    (206) 667-1319