[BioC] Combine two mapped files
Martin Morgan
mtmorgan at fhcrc.org
Fri Jan 8 17:56:09 CET 2010
Droit Arnaud wrote:
> Hello,
>
> I have two mapped files from Chip_seq experiments produced by maq software.
> I read this files with the readAligned function from the ShortRead package.
> I just want to combine this two files in one, I am wondering if anyone know the best method to do this. I am trying to use rbind or cbind ?
>
> dataIP1<- readAligned(s_5_sequence.maq.map",type="MAQMap")
> dataIP2<- readAligned(s_6_sequence.maq.map",type="MAQMap")
> dataIP3<-...
Hi Arnuad,
append(dataIP1, dataIP2)
unfortunately, only two at a time; see
?"AlignedRead-class"
Martin
>
> Thanks
>
> Arnaud.
>
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Martin Morgan
Computational Biology / Fred Hutchinson Cancer Research Center
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