[BioC] DNAcopy installation error

[seth redmond]

I'm running into lots of errors when I try to install DNAcopy and the  
errors aren't suggesting anything obvious to me... This is DNAcopy  
1.20 and R v2.10. Any ideas what I might be doing wrong?

(errors below)

-s


* install options are ' --no-html'

* installing *source* package 'DNAcopy' ...
** libs
g77   -fPIC  -g -c cbsWtstats.f -o cbsWtstats.o
cbsWtstats.f: In subroutine `wtmaxo':
cbsWtstats.f:24:
          double precision, allocatable :: bpsmax(:), bpsmin(:)
                            ^
Invalid type-declaration attribute at (^) -- must be one of:  
DIMENSION(array-spec), EXTERNAL, INTRINSIC, PARAMETER, or SAVE
cbsWtstats.f:24:
          double precision, allocatable :: bpsmax(:), bpsmin(:)
                                                  ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:24:
          double precision, allocatable :: bpsmax(:), bpsmin(:)
                                                   ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:24:
          double precision, allocatable :: bpsmax(:), bpsmin(:)
                                                             ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:24:
          double precision, allocatable :: bpsmax(:), bpsmin(:)
                                                              ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:26:
          integer, allocatable :: bb(:), ibmin(:), ibmax(:)
                   ^
Invalid type-declaration attribute at (^) -- must be one of:  
DIMENSION(array-spec), EXTERNAL, INTRINSIC, PARAMETER, or SAVE
cbsWtstats.f:26:
          integer, allocatable :: bb(:), ibmin(:), ibmax(:)
                                     ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:26:
          integer, allocatable :: bb(:), ibmin(:), ibmax(:)
                                      ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:26:
          integer, allocatable :: bb(:), ibmin(:), ibmax(:)
                                               ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:26:
          integer, allocatable :: bb(:), ibmin(:), ibmax(:)
                                                ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:26:
          integer, allocatable :: bb(:), ibmin(:), ibmax(:)
                                                         ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:26:
          integer, allocatable :: bb(:), ibmin(:), ibmax(:)
                                                          ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:29:
          double precision, allocatable :: bssbij(:), bssijmax(:),  
awt(:)
                            ^
Invalid type-declaration attribute at (^) -- must be one of:  
DIMENSION(array-spec), EXTERNAL, INTRINSIC, PARAMETER, or SAVE
cbsWtstats.f:29:
          double precision, allocatable :: bssbij(:), bssijmax(:),  
awt(:)
                                                  ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:29:
          double precision, allocatable :: bssbij(:), bssijmax(:),  
awt(:)
                                                   ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:29:
          double precision, allocatable :: bssbij(:), bssijmax(:),  
awt(:)
                                                               ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:29:
          double precision, allocatable :: bssbij(:), bssijmax(:),  
awt(:)
                                                                ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:29:
          double precision, allocatable :: bssbij(:), bssijmax(:),  
awt(:)
                                                                       ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:29:
          double precision, allocatable :: bssbij(:), bssijmax(:),  
awt(:)
                                                                        ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:31:
          integer, allocatable :: bloci(:), blocj(:), loc(:)
                   ^
Invalid type-declaration attribute at (^) -- must be one of:  
DIMENSION(array-spec), EXTERNAL, INTRINSIC, PARAMETER, or SAVE
cbsWtstats.f:31:
          integer, allocatable :: bloci(:), blocj(:), loc(:)
                                        ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:31:
          integer, allocatable :: bloci(:), blocj(:), loc(:)
                                         ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:31:
          integer, allocatable :: bloci(:), blocj(:), loc(:)
                                                  ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:31:
          integer, allocatable :: bloci(:), blocj(:), loc(:)
                                                   ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:31:
          integer, allocatable :: bloci(:), blocj(:), loc(:)
                                                          ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:31:
          integer, allocatable :: bloci(:), blocj(:), loc(:)
                                                           ^
Expression at (^) has incorrect data type or rank for its context
cbsWtstats.f:24:
          double precision, allocatable :: bpsmax(:), bpsmin(:)
                                           1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `bpsmax' at (2)  
[initially seen at (1)]
cbsWtstats.f:24:
          double precision, allocatable :: bpsmax(:), bpsmin(:)
                                                      1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `bpsmin' at (2)  
[initially seen at (1)]
cbsWtstats.f:26:
          integer, allocatable :: bb(:), ibmin(:), ibmax(:)
                                  1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `bb' at (2) [initially  
seen at (1)]
cbsWtstats.f:26:
          integer, allocatable :: bb(:), ibmin(:), ibmax(:)
                                         1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `ibmin' at (2)  
[initially seen at (1)]
cbsWtstats.f:26:
          integer, allocatable :: bb(:), ibmin(:), ibmax(:)
                                                   1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `ibmax' at (2)  
[initially seen at (1)]
cbsWtstats.f:29:
          double precision, allocatable :: bssbij(:), bssijmax(:),  
awt(:)
                                           1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `bssbij' at (2)  
[initially seen at (1)]
cbsWtstats.f:29:
          double precision, allocatable :: bssbij(:), bssijmax(:),  
awt(:)
                                                      1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `bssijmax' at (2)  
[initially seen at (1)]
cbsWtstats.f:29:
          double precision, allocatable :: bssbij(:), bssijmax(:),  
awt(:)
                                                                   1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `awt' at (2) [initially  
seen at (1)]
cbsWtstats.f:31:
          integer, allocatable :: bloci(:), blocj(:), loc(:)
                                  1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `bloci' at (2)  
[initially seen at (1)]
cbsWtstats.f:31:
          integer, allocatable :: bloci(:), blocj(:), loc(:)
                                            1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `blocj' at (2)  
[initially seen at (1)]
cbsWtstats.f:31:
          integer, allocatable :: bloci(:), blocj(:), loc(:)
                                                      1
cbsWtstats.f:34: (continued):
          rn = dfloat(n)
          2
Invalid declaration of or reference to symbol `loc' at (2) [initially  
seen at (1)]
cbsWtstats.f:44:
          allocate(bpsmax(nb), bpsmin(nb))
          ^
Invalid declaration of or reference to symbol `allocate' at (^)  
[initially seen at (^)]
cbsWtstats.f:44:
          allocate(bpsmax(nb), bpsmin(nb))
                                          ^
Invalid form for assignment statement at (^)
cbsWtstats.f:45:
          allocate(bb(nb), ibmin(nb), ibmax(nb))
                                                ^
Invalid form for assignment statement at (^)
cbsWtstats.f:46:
          allocate(bssbij(nb2), bssijmax(nb2), awt(nb2))
                                                        ^
Invalid form for assignment statement at (^)
cbsWtstats.f:47:
          allocate(bloci(nb2), blocj(nb2), loc(nb2))
                                                    ^
Invalid form for assignment statement at (^)
cbsWtstats.f:278:
          deallocate(bpsmax, bpsmin, bb, ibmin, ibmax)
          ^
Invalid declaration of or reference to symbol `deallocate' at (^)  
[initially seen at (^)]
cbsWtstats.f:278:
          deallocate(bpsmax, bpsmin, bb, ibmin, ibmax)
                                                      ^
Invalid form for assignment statement at (^)
cbsWtstats.f:279:
          deallocate(bssbij, bssijmax, bloci, blocj, loc, awt)
                                                              ^
Invalid form for assignment statement at (^)
cbsWtstats.f:93: confused by earlier errors, bailing out
make: *** [cbsWtstats.o] Error 1
ERROR: compilation failed for package 'DNAcopy'
* removing '/home/snr02/work/R/DNAcopy.Rcheck/DNAcopy'



-- 
Seth Redmond
   Scientific Programmer, VectorBase
   Kafatos / Christophides Groups
   Div. Cell and Molecular Biology
   Imperial College, London
seth.redmond at imperial.ac.uk
--