[BioC] Problem reading files on FlowCore

Chao-Jen Wong cwon2 at fhcrc.org
Thu Feb 18 00:03:54 CET 2010


Hi Jose,

May I ask why there is a "+" sign before the transformation argument?

-C.J.

Sancho, Jose wrote:
> I am new to FlowCore, and I am trying to get the demo files,as described
> on Flow Cytometry data analysis using Bioconductor- A typical work flow,
> and having difficulties. 
>
>  
>
> I type the instruction flowData <-read.flowSet(path = "C:\Documents and
> Settings\sanjo05\My Documents\BIOCONDUCTOR SOFTWARE", phenodata =
> "annotation.txt", + transformation = FALSE).
>
>  
>
> I get the following error message Error: unexpected '=' in "flowData
> <-read.flowSet(path = "C:\Documents and Settings\sanjo05\My
> Documents\BIOCONDUCTOR SOFTWARE", "annotation.txt", + transformation ="
>
>  
>
> What am I doing wrong?
>
>  
>
> Thanks
>
>  
>
> Jose Sancho
>
>  
>
> Genzyme Corporation
>
> Flow Cytometry Core Facility
>
>
> 	[[alternative HTML version deleted]]
>
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>   


-- 
Chao-Jen Wong
Program in Computational Biology
Division of Public Health Sciences
Fred Hutchinson Cancer Research Center
1100 Fairview Avenue N., M2-B876
PO Box 19024
Seattle, WA 98109
206.667.4485
cwon2 at fhcrc.org



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