[BioC] affy2agi

Yong Li yong.li at zbsa.uni-freiburg.de
Fri Feb 12 23:05:19 CET 2010


Dear Assa,

if you meant affy probe IDs to AGI IDs, the annotation package
ath1121501.db
(http://www.bioconductor.org/packages/release/data/annotation/html/ath1121501.db.html)
provides such mapping. See the first object ath1121501ACCNUM in the
document.

Yong Li

On Fri, 12 Feb 2010 15:24:23 +0100
 Assa Yeroslaviz <frymor at gmail.com> wrote:
> Hi everybody,
> 
> does anyone know how I can convert my list with affy genes to AGI IDs
> (TAIR)?
> 
> I was looking for a package named "cermt", but it is apparently not
> available any more.
> 
> THX
> 
> Assa
> 
> -- 
> Assa Yeroslaviz
> Kockelsberg 22
> 51371 Leverkusen
> Sent from Dusseldorf, NW, Germany
> 
> 	[[alternative HTML version deleted]]
> 
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