[BioC] Agilent annotation package for Drosophila

Yong Li yong.li at zbsa.uni-freiburg.de
Wed Dec 15 20:19:04 CET 2010


Hi Clement,

just want to add that you can get all the annotation files for Agilent 
arrays at the Agilent eArray web site (https://earray.chem.agilent.com/).

Regards,
Yong

Marc Carlson wrote:
> Hi Clement,
> 
> We don't presently have any Agilent annotation packages for fly, but if
> you have a mapping of probes to genes from the manufacturer, you can
> easily generate one using the code in AnnotationDbi.  There is a
> vignette that explains how to do this called SQLForge in the
> AnnotationDbi package.  You can find it here:
> 
> http://www.bioconductor.org/help/bioc-views/release/bioc/html/AnnotationDbi.html
> 
> 
>   Marc
> 
> 
> 
> 
> On 12/14/2010 05:30 PM, Clement Chow wrote:
>> Agilent 4x44 arrays
> 
> _______________________________________________
> Bioconductor mailing list
> Bioconductor at r-project.org
> https://stat.ethz.ch/mailman/listinfo/bioconductor
> Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
>



More information about the Bioconductor mailing list