[BioC] Question about TranscriptDb and makeTranscriptDb method

Song Li songli116 at gmail.com
Fri Dec 10 20:16:58 CET 2010


Hi, All,

I want to thank you for the incredible package which greatly
simplifies our analysis for RNA-seq.

However, I am working with Arabidopsis RNA-seq data, however, it seems
that I have to build a transcriptDb object by myself.  Is there a
function that reads GTF file and make transcriptDB object?

Thanks,
Song Li
-- 
Postdoctoral Associate
Institute for Genome Sciences and Policy
Duke University



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