[BioC] permutation

Steve Lianoglou mailinglist.honeypot at gmail.com
Thu Dec 2 15:56:34 CET 2010


On Thu, Dec 2, 2010 at 1:05 AM, Peevi Ijkl <ipeevi at yahoo.com> wrote:
> Hi
> I am trying to do a permutation with a p cut off of 0.05 from a dataset and
> generate pathways.can someone tell me how to do it

I'm guessing that'd be unlikely without more information from you.

What are you permuting?
What type of data is in your dataset?
What type of pathways are you looking for?
What have you tried to do already?

Steve Lianoglou
Graduate Student: Computational Systems Biology
 | Memorial Sloan-Kettering Cancer Center
 | Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact

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