[BioC] Could I use "genefilter" package for MArray data ?
Wolfgang Huber
whuber at embl.de
Thu Apr 29 00:03:58 CEST 2010
Dear Xiaokuan
you don't use a package on an object - rather, you apply a function to
an object (or multiple objects). The genefilter package contains many
different functions. Which function is it exactly that you want to apply
to your object?
Best wishes
Wolfgang
On 28/04/10 21:43, Xiaokuan Wei wrote:
> Dear List,
>
> I have two color arrays. I plan to use limma package to read these arrays and perform some gene filtering.
> I would like to use "genefilter" package, however, I recall that genefilter works only on expression set.
> Could I directly use genefilter packge on MArray object? Or I have to convert it to ExpressionSet object?
> Thanks.
>
> -Xiaokuan
>
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>
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--
Wolfgang Huber
EMBL
http://www.embl.de/research/units/genome_biology/huber
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