[BioC] Hmisc 3.7.0

Benilton Carvalho beniltoncarvalho at gmail.com
Tue Apr 27 20:45:08 CEST 2010


(r-help question?)

You're installing from the source and you forgot to tell
install.packages that. You were expected to do:

install.packages("Hmisc_3.6-1.tar.gz", repos=NULL, lib=<your lib>,
type="source")

this will require you to have XCode installed + gfortran.

Maybe it is just easier to use:

install.packages("Hmisc", dep=TRUE)

and let R do it for you (it'll download the binary, which is supposed
to 'just work').

b

On Tue, Apr 27, 2010 at 7:07 PM, Francesco Mancuso
<francesco.mancuso at crg.es> wrote:
>
> Dear,
> I'm trying to install the Hmisc tar.gz package from R command line.
>
> This is what I'm doing
>  > install.packages("./Hmisc_3.6-1.tar.gz",
> +
> lib="/Library/Frameworks/R.framework/Versions/2.11/Resources/library/",
> +                  repos=NULL,
> +                  dependencies=TRUE)
>
> And this is the error that R gives:
>  > require(Hmisc)
> Loading required package: Hmisc
> Error in library(package, lib.loc = lib.loc, character.only = TRUE,
> logical.return = TRUE,  :
>   'Hmisc' is not a valid installed package
>
>
> I'm using R 2.11 on a MacOS X 10.6.3.
>
> Any suggestion?
>
> Thanks in advance!
> Francesco
> <http://pasteur.crg.es/portal/page/portal/Internet/>
>
>        [[alternative HTML version deleted]]
>
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