[BioC] Reg: GSEA

[Saroj K Mohapatra]

Hi Rohit:

Using the GOstats you can test for both over and under representation of 
GO terms using Hypergeometric test. There is a vignette "How To Use 
GOstats Testing Gene Lists for GO Term Association".

Best wishes,

Saroj


Rohit Farmer wrote:
> Hello everyone ...
>
> I just did a moderate t statistics using limma package and found out a
> list of genes which are differentially expressed now i wan to go for
> gene set enrichment analysis using GO terms and pathway analysis ...
> so can anyone suggest me the bioconductor packages which i can use for
> the same ..
>
> Thanks and regards
>
> Rohit
>