[BioC] Reg: Different clustering methods available for affy data

[Thomas Girke]

Very useful for finding packages/functions on various topics are the task views 
pages for R and BioC: 

R: 
http://cran.at.r-project.org/web/views/
Task views on clustering
http://cran.at.r-project.org/web/views/Cluster.html

BioC:
http://www.bioconductor.org/packages/release/Software.html

On Wed, Apr 14, 2010 at 05:53:49AM -0400, Sean Davis wrote:
> On Tue, Apr 13, 2010 at 11:27 PM, Rohit Farmer <rohit.farmer at gmail.com> wrote:
> > Hello everyone ...
> >
> > I just wanted to know what are the different cluster methods available
> > in bioconductor apart from K-means and hierarchical clustering and
> > what are the libraries can be used for the same purpose .... I am
> > using affymetrix data
> >
> 
> Hi, Rohit.
> 
> This is a question that you can answer better yourself than we can.
> To find out what is available on your system (installed), try:
> 
> help.search('clustering')
> 
> If that isn't satisfying, try:
> 
> RSiteSearch('clustering',restrict='functions',matchesPerPage=100)
> 
> This list will include functions in packages perhaps not even
> installed locally.  You can then install and test as you see fit.  The
> vast majority of these clustering methods are not specific to gene
> expression data.
> 
> Sean
> 
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