[BioC] RNA degradation plot

[Benilton Carvalho]

hmmm... i see... let's wait a little bit then. b

On Mon, Apr 12, 2010 at 1:16 PM, Assa Yeroslaviz <frymor at gmail.com> wrote:
> nope that won't work:
>
> deg <- AffyRNAdeg(affybatch)
> plotAffyRNAdeg(deg, lty = 1:length(ArrayIndex_norm),col =
> 1:length(ArrayIndex_norm))
> legend(-1.5, 75,
>     as.character(sampleNames(eset)),
>     lty = 1:length(ArrayIndex_norm),
>     col = 1:length(ArrayIndex_norm), cex = 0.6)
>
> All of my lines are still solid.
>
> On Mon, Apr 12, 2010 at 14:01, Benilton Carvalho
> <beniltoncarvalho at gmail.com> wrote:
>>
>> you need to pass 'lty' also to the plotAffyRNAdeg function (as you did
>> with legend). b
>>
>> On Mon, Apr 12, 2010 at 12:49 PM, Assa Yeroslaviz <frymor at gmail.com>
>> wrote:
>> > Hi,
>> >
>> > I would like to know, if there is a possibility to plot the RNA
>> > Degradation
>> > with different line types.
>> > I tried it this way:
>> >
>> > deg <- AffyRNAdeg(affybatch)
>> > plotAffyRNAdeg(deg ,col = 1:length(ArrayIndex_norm))
>> > legend(-1.5, 75,
>> >    as.character(sampleNames(eset)),
>> >    lty = 1:length(ArrayIndex_norm),
>> >    col = 1:length(ArrayIndex_norm), cex = 0.6)
>> >
>> > But I'm getting only solid lines in my graph, but different types of
>> > lines
>> > in my legend.
>> >
>> > Is it possible to present several types of lines in my plot?
>> >
>> > THX
>> >
>> > Assa
>> >
>> >        [[alternative HTML version deleted]]
>> >
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>